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Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar

Yıl 2020, , 52 - 61, 26.08.2020
https://doi.org/10.38058/ijsl.701095

Öz

Rice is a modern short-day plant but equally flower during non-inductive long-day condition due to the possession of second florigen, Rice Flowering Locus T1 (RFT1). RFT1 is an ortholog of Arabidopsis FT gene which triggers flowering induction under long-day (LD) condition. The gene isolation from Malaysian upland rice cv. Wai that induces flowering were reported. Nucleic acids isolation and amplification of the RFT1 were observed, then phylogenetic relationship among other 5 indica and 1 japonica rice were inferred by comparing the gene amino acids sequence data sets using multiple sequence alignment databases. The amplicon quality result indicated that the gene was fully amplified at above 0.5kb, whereas the sequence alignment revealed that the RFT1 gene was partially amplified based on the gaps identified. Among the 6 indica cultivars sequence aligned, they were almost all conserved except on only 12 amino acids. While the cladogram tree result classified the cultivars into three major groups and include Wai under clade that contains both indica and japonica cultivars. This finding concluded that the cultivars are of high evolutionary relationship and well established their molecular relationship. The cultivars relationship provides necessary information for better understanding of molecular evolution and designing scientific breeding system for generation of new rice cultivar.

Destekleyen Kurum

UNIVERSITI TEKNOLOGI MALAYSIA

Proje Numarası

NIL

Teşekkür

SPECIAL THANK TO IJSL for hiving me the opportunity

Kaynakça

  • 1- DR. MOHAMMED JIBRIN NDEJIKO, DEPARTMENT OF MICROBIOLOGY, IBB-UNIVERSITY, LAPAI. NIGERI. ndejiko@gmail.com
  • 2- DR. ABDULKARIM ALI DEBA, ATBU, BAUCHI. NIGERIA. abdulkarimalideba@gmail.com
Yıl 2020, , 52 - 61, 26.08.2020
https://doi.org/10.38058/ijsl.701095

Öz

Proje Numarası

NIL

Kaynakça

  • 1- DR. MOHAMMED JIBRIN NDEJIKO, DEPARTMENT OF MICROBIOLOGY, IBB-UNIVERSITY, LAPAI. NIGERI. ndejiko@gmail.com
  • 2- DR. ABDULKARIM ALI DEBA, ATBU, BAUCHI. NIGERIA. abdulkarimalideba@gmail.com
Toplam 2 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Mühendislik
Bölüm Research Articles
Yazarlar

Sulaıman Mohammed 0000-0003-3094-4769

Proje Numarası NIL
Yayımlanma Tarihi 26 Ağustos 2020
Yayımlandığı Sayı Yıl 2020

Kaynak Göster

APA Mohammed, S. (2020). Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. International Journal of Science Letters, 2(2), 52-61. https://doi.org/10.38058/ijsl.701095
AMA Mohammed S. Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. IJSL. Ağustos 2020;2(2):52-61. doi:10.38058/ijsl.701095
Chicago Mohammed, Sulaıman. “Isolation and Molecular Phylogeny of RFT1 Gene from Upland Rice Leaves Cultivar”. International Journal of Science Letters 2, sy. 2 (Ağustos 2020): 52-61. https://doi.org/10.38058/ijsl.701095.
EndNote Mohammed S (01 Ağustos 2020) Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. International Journal of Science Letters 2 2 52–61.
IEEE S. Mohammed, “Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar”, IJSL, c. 2, sy. 2, ss. 52–61, 2020, doi: 10.38058/ijsl.701095.
ISNAD Mohammed, Sulaıman. “Isolation and Molecular Phylogeny of RFT1 Gene from Upland Rice Leaves Cultivar”. International Journal of Science Letters 2/2 (Ağustos 2020), 52-61. https://doi.org/10.38058/ijsl.701095.
JAMA Mohammed S. Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. IJSL. 2020;2:52–61.
MLA Mohammed, Sulaıman. “Isolation and Molecular Phylogeny of RFT1 Gene from Upland Rice Leaves Cultivar”. International Journal of Science Letters, c. 2, sy. 2, 2020, ss. 52-61, doi:10.38058/ijsl.701095.
Vancouver Mohammed S. Isolation and molecular phylogeny of RFT1 gene from upland rice leaves cultivar. IJSL. 2020;2(2):52-61.