Bolbitius reticulatus'un (Agaricales: Bolbitiaceae) Nükleer ITS ve LSU rDNA Sekans Verileriyle Türkiye'deki İlk Kaydı

Öz

Avrupa bölgesine ait olan Bolbitius reticulatus, hem morfolojik karakterlere hem de yapılandırılmış çok lokuslu veri setine (nrITS, nrLSU rDNA) dayalı olarak, Türkiye'nin kuzey doğusundaki Karadeniz Bölgesi'nden ilk kez rapor edilmektedir. Türün makro ve mikro morfolojik deskripsiyonu, doğal ortamdaki taze bazidiomların fotoğrafları ve mikroskobik özelliklerinin çizimleri eşliğinde sağlanmaktadır. Sunulan türün fenotipik ve moleküler olarak ilişkili taksonlarla karşılaştırılması aydınlatılmış ve detaylı olarak tartışılmıştır.

Anahtar Kelimeler

• Bazidiyomikota
• Yeni kayıt
• Filogeni
• Taksonomi
• Türkiye

Proje Numarası

2021/56

First Record of Bolbitius reticulatus (Agaricales: Bolbitiaceae) in Turkey, with Nuclear ITS and LSU rDNA Sequences Data

Öz

Bolbitius reticulatus, which is pertained to European region, is reported here for the first time from Black Sea Region, north-eastern Turkey based on both morphological characters and constructed multilocus dataset (nrITS, nrLSU rDNA). A complete macro- and micro-morphological description of the species is provided along with the photographs of fresh basidiomes in natural habitat and the line drawings of its microscopic stuctures. Comparisons of the presented species with phenotypically and molecularly related taxa are elucidated and discussed in detail.

Anahtar Kelimeler

• Basidiomycota
• New record
• Phylogeny
• Taxonomy
• Turkey

Destekleyen Kurum

Research Fund of the Isparta University of Applied Sciences

Proje Numarası

2021/56

Kaynakça

1. Arnolds, E. (2003). Notulae ad Floram Agaricinam Neerlandicam - XXXIX. Bolbitius. Persoonia, 18: 201-214.
2. Arnolds, E. (2005). Bolbitius Fr. In: Noordeloos, M.E., Kuyper, T.W. and Vellinga, E.C. (eds) Flora Agaricina Neerlandica, Vol 6. Boca Raton: CRC Press, pp. 112–119.
3. Enderle, M., Kajan, E. and Krieglsteiner, G.J. (1985). Studien in der Gattung Bolbitius Fries. Mitt Arbeitsgem Pilzk Niederrhein, 3: 5-34.
4. Gardes, M. and Bruns, T.D. (1993). ITS primers with enhanced specificity for Basidiomycetes application to the identification of mycorrhizae and rusts. Molecular Ecology, 2: 113-118. doi: 10.1111/j.1365-294X.1993.tb00005.x
5. Hall, T.A. (1999). BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41: 95-98.
6. Hausknecht, A. and Contu, M. (2006). Bolbitius demangei in Italien. Öst. Z. Pilzk., 1: 7-10.
7. Hausknecht, A., Antonín, V. and Polčák, J. (2007). A new, conspicuously coloured Bolbitius species from the Czech Republic. Czech Mycol., 59 (1): 1-9.
8. Hausknecht, A., Contu, M., Krisai-Greilhuber, I., Dähncke, R.M. and Vizzini, A. (2010). Bolbitius excoriatus (Basidiomycota, Agaricales), a new species from Spain: Öst. Z. Pilzk., 19: 122.

9. Katoh, K. and Standley, D.M. (2013). MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30: 772-780. doi: 10.1093/molbev/mst010
10. Kaygusuz, O., Knudsen, H., Menolli, Jr. N. and Türkekul, I. (2021a). Pluteus anatolicus (Pluteaceae, Agaricales): a new species of Pluteus sect. Celluloderma from Turkey based on both morphological and molecular evidence. Phytotaxa, 482: 240-250. doi: 10.11646/phytotaxa.482.3.2
11. Kaygusuz, O., Türkekul, I., Knudsen, H. and Menolli, Jr. N. (2021b). Volvopluteus and Pluteus section Pluteus (Agaricales: Pluteaceae) in Turkey based on morphological and molecular data. Turkish Journal of Botany, 45 (3): 224-242. doi: 10.3906/bot-2012-7
12. Malysheva, E.F., Malysheva, V.F. and Svetasheva, T.Y. (2015). Molecular phylogeny and taxonomic revision of the genus Bolbitius (Bolbitiaceae, Agaricales) in Russia. Mycol. Progress, 14: 64. doi.org/10.1007/s11557-015-1087-2
13. Matheny, P.B., Curtis, J.M., Hofstetter, V., Aime, M.C., Moncalvo, J.M., Ge, Z.W., Slot, J.C., Ammirati, J.F., Baroni, T.J., Bougher, N.L., Hughes, K.W., Lodge, D.J., Kerrigan, R.W., Seidl, M.T., Aanen, D.K., DeNitis, M., Daniele, G.M., Desjardin, D.E., Kropp, B.R., Norvell, L.L., Parker, A., Vellinga, E.C., Vilgalys, R. and Hibbett, D.S. (2006). Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia 98 (6): 982-995.
14. Moncalvo, J.M., Vilgalys, R., Redhead, S.A., Johnson, J.E., James, T.Y., Catherine, A.M., Hofstetter, V., Verduin, S.J., Larsson, E., Baroni, T.J., Greg, T.R., Jacobsson, S., Clémençon, H. and Miller, O.K. Jr. (2002). One hundred and seventeen clades of euagarics. Mol. Phylogenet. Evol., 23: 357-400.
15. Pegler, D.N. (1986). Agaric flora of Sri Lanka. London: Kew Bulletin Additional Series 12, pp. 514.
16. Rambaut, A. (2016). FigTree v1.4.3: Tree figure drawing tool. Website http://tree.bio.ed.ac.uk/software/figtree/ [accessed 1 June 2021].
17. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. and Huelsenbeck, J.P. (2012). MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61: 589-542. doi: 10.1093/sysbio/sys029
18. Singer, R. (1951). The Agaricales (Mushrooms) in modern taxonomy. Lilloa, 22: 1-832.
19. Singer, R. (1986). The Agaricales in Modern Taxonomy, 4th ed. Germany: Sven Koeiltz Scientific Books, pp. 981.
20. Stamatakis, A. (2014). RAxML version 8: A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies. Bioinformatics, 30: 1312-1313. doi: 10.1093/bioinformatics/btu033
21. Tóth, A., Hausknecht, A., Krisai-Greilhuber, I., Papp, T., Vágvölgyi, C. and Nagy, L.G. (2013). Iteratively refined guide trees help improving alignment and phylogenetic inference in the mushroom family Bolbitiaceae. PLoS ONE, 8: e56143. doi:10.1371/journal.pone.0056143
22. Vilgalys, R. and Hester, M. (1990). Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology, 172: 4238-4246.
23. Watling, R. (1982). British Fungus Flora. Agarics and Boleti 3. Bolbitiaceae: Agrocybe, Bolbitius and Conocybe. Edinburgh: HMSO.
24. White, T.J., Bruns, T., Lee, S. and Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. and White, T.J. (eds). PCR Protocols: A Guide to Methods and Applications. New York: Academic Press, pp. 315-322. doi: 10.1016/B978-0-12-372180-8.50042-1