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Yıl 2016, Cilt: 3 Sayı: 2, 24 - 29, 02.12.2016

Öz

Kaynakça

  • Bus VGM, Rikkerink EHA, Caffier V, Durel CE, Plummer KM, 2011. Revision of the Nomenclature of the Differential Host-Pathogen Interactions of Venturia inaequalis and Malus. Annual Rev Phytopathol 49: 19.1-19.23 [doi: 10.1146/annurev-phyto-072910-095339].
  • Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, van de Weg E, Gardiner SE, Bassil N, Peace C, 2012. Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple. PLoS One 7: e31745.
  • Goddard M, Hayes B, 2007. Genomic Selection. J. Animal Breed. Genet. 124: 323-330.
  • Hansche PE, 1983. Response to selection: 154-171. In: Janick J and Moore JN (eds). Methods in Fruit Breeding. Purdue University Press, West Lafayette, Ind USA.
  • Heffner EL, Sorrells ME, Jannink JL, 2009. Genomic Selection for Crop Improvement. Crop Sci. 49: 1-12.
  • Kumar S, Bink MCAM, Volz RK, Bus VGM, Chagné D, 2012. Towards Genomic Selection in Apple (Malus × domestica Borkh.) Breeding Programmes: Prospects, Challenges and Strategies. Tree Genet. Gen. 8: 1-14.
  • Kumar S, Chagné D, Bink MCAM, Volz RK, Whitworth C, Carlisle C, 2012. Genomic Selection for Fruit Quality Traits in Apple (Malus × domestica Borkh.). PLoS One 7: e36674.
  • Kumar S, Garrick DJ, Bink MCAM, Whitworth C, Chagné D, Volz RK, 2013. Novel Genomic Approaches Unravel Genetic Architecture of Complex Traits in Apple. BMC Genomics 14: 393.
  • Kumar S, Volz RK, Alspach PA, Bus VGM, 2010. Development of a Recurrent Apple Breeding Programme in New Zealand: a Synthesis of Results, and a Proposed Revised Breeding Strategy. Euphytica 173: 207-222.
  • Jänsch M, Broggini GAL, Weger J, Bus VGM, Gardiner SE, Bassett H, Patocchi A, 2015. Identification of SNPs Linked to Eight Apple Disease Resistance Loci. Mol. Breeding 35: 45. [DOI 10.1007/s11032-015-0242-4].
  • Meuwissen THE, Hayes BJ, Goddard ME, 2001. Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps. Genetics 157: 1819-1829.
  • Noiton DAM, Alspach PA, 1996. Founding Clones, Inbreeding, Coancestry, and Status Number of Modern Apple Cultivars. J. Am. Soc. Hortic. Sci. 121: 773-782.
  • Noiton DAM, Shelbourne CJA, 1992. Quantitative Genetics in an Apple Breeding Strategy. Euphytica 60: 213-219.
  • Varshney RK, Graner A, Sorrells ME, 2005. Genomics-Assisted Breeding for Crop Improvement. Trends Plant Sci. 10: 621-630.

Apple Breeding: Marker-Assisted Selection and Beyond

Yıl 2016, Cilt: 3 Sayı: 2, 24 - 29, 02.12.2016

Öz

Apple breeding is very active all around the world with more than twenty scientific institutions involved and private companies and some 300 thousand seedlings screened each year. The story of apple breeding has followed the steps of any crop with the exception that the frequent occurrence of sport mutations and the discovery of chance seedlings has produced many varieties of the market that flanked those obtained through controlled crosses. The conventional breeding based on the cross of good parents and followed by phenotypic selection took the stage for long time. Studies on the heritability of traits can be found in the literature, but other genetic studies that would help the selection of cross parents, like the analysis of combining ability (CA), are rather rare. In the 1980s the molecular markers became popular among apple geneticists and helped to produce linkage maps and to assist breeders in the so called marker-assisted selection. In the very last years, thanks to the apple genome sequence that provided hundreds of thousand SNP markers easily accommodated on DNA-chips, a new approach to breeding based on the genome-wide estimation of breeding value (GWEBV) of parents and offsprings, without any preliminary knowledge on marker-traits association appeared on the scene. This paper discusses the evolution of apple breeding by commenting the steps briefly outlined above.

Kaynakça

  • Bus VGM, Rikkerink EHA, Caffier V, Durel CE, Plummer KM, 2011. Revision of the Nomenclature of the Differential Host-Pathogen Interactions of Venturia inaequalis and Malus. Annual Rev Phytopathol 49: 19.1-19.23 [doi: 10.1146/annurev-phyto-072910-095339].
  • Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, van de Weg E, Gardiner SE, Bassil N, Peace C, 2012. Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple. PLoS One 7: e31745.
  • Goddard M, Hayes B, 2007. Genomic Selection. J. Animal Breed. Genet. 124: 323-330.
  • Hansche PE, 1983. Response to selection: 154-171. In: Janick J and Moore JN (eds). Methods in Fruit Breeding. Purdue University Press, West Lafayette, Ind USA.
  • Heffner EL, Sorrells ME, Jannink JL, 2009. Genomic Selection for Crop Improvement. Crop Sci. 49: 1-12.
  • Kumar S, Bink MCAM, Volz RK, Bus VGM, Chagné D, 2012. Towards Genomic Selection in Apple (Malus × domestica Borkh.) Breeding Programmes: Prospects, Challenges and Strategies. Tree Genet. Gen. 8: 1-14.
  • Kumar S, Chagné D, Bink MCAM, Volz RK, Whitworth C, Carlisle C, 2012. Genomic Selection for Fruit Quality Traits in Apple (Malus × domestica Borkh.). PLoS One 7: e36674.
  • Kumar S, Garrick DJ, Bink MCAM, Whitworth C, Chagné D, Volz RK, 2013. Novel Genomic Approaches Unravel Genetic Architecture of Complex Traits in Apple. BMC Genomics 14: 393.
  • Kumar S, Volz RK, Alspach PA, Bus VGM, 2010. Development of a Recurrent Apple Breeding Programme in New Zealand: a Synthesis of Results, and a Proposed Revised Breeding Strategy. Euphytica 173: 207-222.
  • Jänsch M, Broggini GAL, Weger J, Bus VGM, Gardiner SE, Bassett H, Patocchi A, 2015. Identification of SNPs Linked to Eight Apple Disease Resistance Loci. Mol. Breeding 35: 45. [DOI 10.1007/s11032-015-0242-4].
  • Meuwissen THE, Hayes BJ, Goddard ME, 2001. Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps. Genetics 157: 1819-1829.
  • Noiton DAM, Alspach PA, 1996. Founding Clones, Inbreeding, Coancestry, and Status Number of Modern Apple Cultivars. J. Am. Soc. Hortic. Sci. 121: 773-782.
  • Noiton DAM, Shelbourne CJA, 1992. Quantitative Genetics in an Apple Breeding Strategy. Euphytica 60: 213-219.
  • Varshney RK, Graner A, Sorrells ME, 2005. Genomics-Assisted Breeding for Crop Improvement. Trends Plant Sci. 10: 621-630.
Toplam 14 adet kaynakça vardır.

Ayrıntılar

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Yazarlar

Raffaele Testolin Bu kişi benim

Yayımlanma Tarihi 2 Aralık 2016
Yayımlandığı Sayı Yıl 2016 Cilt: 3 Sayı: 2

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