Derleme
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Yıl 2020, Cilt: 3 Sayı: Özel Sayı, 3 - 10, 05.08.2020

Öz

Kaynakça

  • 1. Harapan H, Itoh N, Yufika A, Winardi W, Keam S, Te H, Megawati D, Hayati Z, Wagner AL, Mudatsir M. Coronavirus disease 2019 (COVID-19): A literature review. J Infect Public Health. 2020 May;13(5):667-673.
  • 2. Gorbalenya A.E.A. Severe acute respiratory syndrome-related coronavirus: the species and its viruses – a statement of the Coronavirus Study Group. BioRxiv. 2020.
  • 3. Fan BE, Chong VCL, Chan SSW, et al. Hematologic parameters in patients with COVID-19 infection. Am J Hematol. 2020 ve doi:10.1002/ajh.25774, 95(6):E131-E134.
  • 4. Huang, C., Wang, Y., Li, X., Ren, L., Zhao, J., Hu, Y., Zhang, L., Fan, G., Xu, J., Gu, X., Cheng, Z., Yu, T., Xia, J., Wei, Y., Wu, W., Xie, X., Yin, W., Li, H., Liu, M., Xiao, Y., … Cao, B. (2020). Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet (London, England), 395(10223), 497–506.
  • 5. Lippi, G., & Plebani, M. (2020). Laboratory abnormalities in patients with COVID-2019 infection. Clin Chem Lab Med, 58(7), 1131–1134.
  • 6. Henry, B. M., Lippi, G., & Plebani, M. (2020). Laboratory abnormalities in children with novel coronavirus disease 2019. Clin Chem Lab Med, 58(7), 1135–1138.
  • 7. Chen F, Liu Z, Zhang F, Xiong RH, Chen Y, Cheng XF, et al. [First case of severe childhood novel coronavirus pneumonia in China]. Chin J Pediatr 2020 ve 58:179–82.
  • 8. Frater, J. L., Zini, G., d'Onofrio, G., & Rogers, H. J. (2020). COVID-19 and the clinical hematology laboratory. Int J Lab Hematol, 42 Suppl 1, 11–18.
  • 9. Fu, J., Kong, J., Wang, W., Wu, M., Yao, L., Wang, Z., Jin, J., Wu, D., & Yu, X. (2020). The clinical implication of dynamic neutrophil to lymphocyte ratio and D-dimer in COVID-19: A retrospective study in Suzhou China. Thrombosis research, 192, 3–8.
  • 10. Lippi G, Plebani M. The critical role of laboratory medicine during coronavirus disease 2019 (COVID-19) and other viral outbreaks. Clin Chem Lab Med. 2020 ve doi:10.1515/cclm-2020-0240, 58(7):1063-1069.
  • 11. Mo, P., Xing, Y., Xiao, Y., Deng, L., Zhao, Q., Wang, H., Xiong, Y., Cheng, Z., Gao, S., Liang, K., Luo, M., Chen, T., Song, S., Ma, Z., Chen, X., Zheng, R., Cao, Q., Wang, F., & Zhang, Y. (2020). Clinical characteristics of refractory COVID-19 pneumonia in Wuhan, China. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa270. Advance online publication.
  • 12. Salamanna F, Maglio M, Landini MP, Fini M. Platelet functions and activities as potential hematologic parameters related to Coronavirus Disease 2019 (Covid-19) [published online ahead of print, 2020 May 13]. Platelets. 2020 ve doi:10.1080/09537104.2020., 1-6.
  • 13. Wu, J., Zhang, P., Zhang, L., Meng, W., Li, J., Tong, C., ... & Zhao, M. (2020). Rapid and accurate identification of COVID-19 infection through machine learning based on clinical available blood test results. medRxiv.
  • 14. Zhang, J. J., Dong, X., Cao, Y. Y., Yuan, Y. D., Yang, Y. B., Yan, Y. Q., Akdis, C. A., & Gao, Y. D. (2020). Clinical characteristics of 140 patients infected with SARS-CoV-2 in Wuhan, China. Allergy, 10.1111/all.14238. Advance online publication.
  • 15. Patel A, Jernigan DB, 2019-nCoV CDC Response Team. Initial Public Health Response and Interim Clinical Guidance for the 2019 Novel Coronavirus Outbreak - United States, December 31, 2019-February 4, 2020. MMWR Morb Mortal Wkly Rep 2020; 69:140.
  • 16. Angela M Caliendo, Kimberly E Hanson, Coronavirus disease 2019 (COVID-19): Diagnosis , uptodate.com. Jun 19,2020, online article.
  • 17. Fang, Y., Zhang, H., Xie, J., Lin, M., Ying, L., Pang, P., & Ji, W. (2020). Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR. Radiology, 200432. Advance online publication.
  • 18. Lee, T. H., Lin, R. J., Lin, R., Barkham, T., Rao, P., Leo, Y. S., Lye, D. C., Young, B., & National Centre for Infectious Diseases COVID-19 Outbreak Research Team (2020). Testing for SARS-CoV-2: Can We Stop at Two?. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa459. Advance online publication.
  • 19. Wang, W., Xu, Y., Gao, R., Lu, R., Han, K., Wu, G., & Tan, W. (2020). Detection of SARS-CoV-2 in Different Types of Clinical Specimens. JAMA, 323(18), 1843–1844. Advance online publication.
  • 20. COVID-19 Investigation Team (2020). Clinical and virologic characteristics of the first 12 patients with coronavirus disease 2019 (COVID-19) in the United States. Nature medicine, 26(6), 861–868.
  • 21. Kucirka, L. M., Lauer, S. A., Laeyendecker, O., Boon, D., & Lessler, J. (2020). Variation in False-Negative Rate of Reverse Transcriptase Polymerase Chain Reaction-Based SARS-CoV-2 Tests by Time Since Exposure. Annals of internal medicine, M20-1495. Advance online publication.
  • 22. Furukawa NW, Brooks JT, Sobel J. Evidence Supporting Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 While Presymptomatic or Asymptomatic. Emerg Infect Dis 2020; 26.
  • 23. Wölfel R, Corman VM, Guggemos W, Seilmaier M, Zange S, Müller MA, et al. Virological assessment of hospitalized patients with COVID-2019. Nature. 2020; Epub ahead of print.
  • 24. Interim Guidelines for COVID-19 Antibody Testing; cdc.gov; Advance online publication.
  • 25. Guo, L., Ren, L., Yang, S., Xiao, M., Chang, D., Yang, F., Dela Cruz, C. S., Wang, Y., Wu, C., Xiao, Y., Zhang, L., Han, L., Dang, S., Xu, Y., Yang, Q., Xu, S., Zhu, H., Xu, Y., Jin, Q., Sharma, L., … Wang, J. (2020). Profiling Early Humoral Response to Diagnose Novel Coronavirus Disease (COVID-19). Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa310. Advance online publication.
  • 26. Zhao, J., Yuan, Q., Wang, H., Liu, W., Liao, X., Su, Y., Wang, X., Yuan, J., Li, T., Li, J., Qian, S., Hong, C., Wang, F., Liu, Y., Wang, Z., He, Q., Li, Z., He, B., Zhang, T., Fu, Y., … Zhang, Z. (2020). Antibody responses to SARS-CoV-2 in patients of novel coronavirus disease 2019. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa344. Advance online publication.

Laboratory Diagnosis of COVID-19, a Review of Literature

Yıl 2020, Cilt: 3 Sayı: Özel Sayı, 3 - 10, 05.08.2020

Öz

Devam etmekte olan COVID-19 pandemisi Dünya’daki tüm ülkeleri yaygın bir şekilde etkileyen bir sağlık problemidir. Hastalığın hızlı tanısındaki sorunlar da sağlık kuruluşlarının önemli endişelerinden biridir. Nazofarengeal ve alt solunum yolları örneklerinden yapılan NAAT (Nükleik asit amplifikasyon testleri) tanıda daha fazla özgüllüğe sahiptir; ancak, hâli hazırda devam etmekte olan pandemi sürecinde her şüphelenilen hastaya bu testleri uygulamak yoğunluk nedeniyle kolay değildir. Başvuru sırasında rutin olarak uygulanan bazı basit testler ciddi veya daha sonra ciddi olabilecek vakaların hastaneye yatırılması konusunda fikir verebilir. Bu derleme, klinisyenlerin hastaların tanı ve tedavi süreçlerini yönetiminde, pandemi yoğunluğunun ortasında hızlı ve isabetli karar vermelerine yardımcı olmak için nonspesifik testler ve COVID-19’un Mikrobiyolojik testlerine yoğunlaşmıştır.


Ongoing COVID-19 pandemic outbreak is an emerging health issue affecting every country in the World. Problems at rapid diagnosis of the disease is also another important concern of health facilities. NAATs (Nucleic acid amplification tests) from nasopharyngeal and lower respiratory airway samples have more specifity at diagnosis; but the feasibility of sampling these tests for every suspected patients during ongoing pandemic outbreak is not easy due to intensity of hospitals. Routine simple tests on admission may give an idea about hospitalization of severe cases or cases who can be severe later. This review is focused on nonspecific and Microbiological tests of COVID-19 to help clinicians make decisions about management of diagnosis and treatment process of patients fastly and accurately in the middle of pandemic intensity.

Kaynakça

  • 1. Harapan H, Itoh N, Yufika A, Winardi W, Keam S, Te H, Megawati D, Hayati Z, Wagner AL, Mudatsir M. Coronavirus disease 2019 (COVID-19): A literature review. J Infect Public Health. 2020 May;13(5):667-673.
  • 2. Gorbalenya A.E.A. Severe acute respiratory syndrome-related coronavirus: the species and its viruses – a statement of the Coronavirus Study Group. BioRxiv. 2020.
  • 3. Fan BE, Chong VCL, Chan SSW, et al. Hematologic parameters in patients with COVID-19 infection. Am J Hematol. 2020 ve doi:10.1002/ajh.25774, 95(6):E131-E134.
  • 4. Huang, C., Wang, Y., Li, X., Ren, L., Zhao, J., Hu, Y., Zhang, L., Fan, G., Xu, J., Gu, X., Cheng, Z., Yu, T., Xia, J., Wei, Y., Wu, W., Xie, X., Yin, W., Li, H., Liu, M., Xiao, Y., … Cao, B. (2020). Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet (London, England), 395(10223), 497–506.
  • 5. Lippi, G., & Plebani, M. (2020). Laboratory abnormalities in patients with COVID-2019 infection. Clin Chem Lab Med, 58(7), 1131–1134.
  • 6. Henry, B. M., Lippi, G., & Plebani, M. (2020). Laboratory abnormalities in children with novel coronavirus disease 2019. Clin Chem Lab Med, 58(7), 1135–1138.
  • 7. Chen F, Liu Z, Zhang F, Xiong RH, Chen Y, Cheng XF, et al. [First case of severe childhood novel coronavirus pneumonia in China]. Chin J Pediatr 2020 ve 58:179–82.
  • 8. Frater, J. L., Zini, G., d'Onofrio, G., & Rogers, H. J. (2020). COVID-19 and the clinical hematology laboratory. Int J Lab Hematol, 42 Suppl 1, 11–18.
  • 9. Fu, J., Kong, J., Wang, W., Wu, M., Yao, L., Wang, Z., Jin, J., Wu, D., & Yu, X. (2020). The clinical implication of dynamic neutrophil to lymphocyte ratio and D-dimer in COVID-19: A retrospective study in Suzhou China. Thrombosis research, 192, 3–8.
  • 10. Lippi G, Plebani M. The critical role of laboratory medicine during coronavirus disease 2019 (COVID-19) and other viral outbreaks. Clin Chem Lab Med. 2020 ve doi:10.1515/cclm-2020-0240, 58(7):1063-1069.
  • 11. Mo, P., Xing, Y., Xiao, Y., Deng, L., Zhao, Q., Wang, H., Xiong, Y., Cheng, Z., Gao, S., Liang, K., Luo, M., Chen, T., Song, S., Ma, Z., Chen, X., Zheng, R., Cao, Q., Wang, F., & Zhang, Y. (2020). Clinical characteristics of refractory COVID-19 pneumonia in Wuhan, China. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa270. Advance online publication.
  • 12. Salamanna F, Maglio M, Landini MP, Fini M. Platelet functions and activities as potential hematologic parameters related to Coronavirus Disease 2019 (Covid-19) [published online ahead of print, 2020 May 13]. Platelets. 2020 ve doi:10.1080/09537104.2020., 1-6.
  • 13. Wu, J., Zhang, P., Zhang, L., Meng, W., Li, J., Tong, C., ... & Zhao, M. (2020). Rapid and accurate identification of COVID-19 infection through machine learning based on clinical available blood test results. medRxiv.
  • 14. Zhang, J. J., Dong, X., Cao, Y. Y., Yuan, Y. D., Yang, Y. B., Yan, Y. Q., Akdis, C. A., & Gao, Y. D. (2020). Clinical characteristics of 140 patients infected with SARS-CoV-2 in Wuhan, China. Allergy, 10.1111/all.14238. Advance online publication.
  • 15. Patel A, Jernigan DB, 2019-nCoV CDC Response Team. Initial Public Health Response and Interim Clinical Guidance for the 2019 Novel Coronavirus Outbreak - United States, December 31, 2019-February 4, 2020. MMWR Morb Mortal Wkly Rep 2020; 69:140.
  • 16. Angela M Caliendo, Kimberly E Hanson, Coronavirus disease 2019 (COVID-19): Diagnosis , uptodate.com. Jun 19,2020, online article.
  • 17. Fang, Y., Zhang, H., Xie, J., Lin, M., Ying, L., Pang, P., & Ji, W. (2020). Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR. Radiology, 200432. Advance online publication.
  • 18. Lee, T. H., Lin, R. J., Lin, R., Barkham, T., Rao, P., Leo, Y. S., Lye, D. C., Young, B., & National Centre for Infectious Diseases COVID-19 Outbreak Research Team (2020). Testing for SARS-CoV-2: Can We Stop at Two?. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa459. Advance online publication.
  • 19. Wang, W., Xu, Y., Gao, R., Lu, R., Han, K., Wu, G., & Tan, W. (2020). Detection of SARS-CoV-2 in Different Types of Clinical Specimens. JAMA, 323(18), 1843–1844. Advance online publication.
  • 20. COVID-19 Investigation Team (2020). Clinical and virologic characteristics of the first 12 patients with coronavirus disease 2019 (COVID-19) in the United States. Nature medicine, 26(6), 861–868.
  • 21. Kucirka, L. M., Lauer, S. A., Laeyendecker, O., Boon, D., & Lessler, J. (2020). Variation in False-Negative Rate of Reverse Transcriptase Polymerase Chain Reaction-Based SARS-CoV-2 Tests by Time Since Exposure. Annals of internal medicine, M20-1495. Advance online publication.
  • 22. Furukawa NW, Brooks JT, Sobel J. Evidence Supporting Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 While Presymptomatic or Asymptomatic. Emerg Infect Dis 2020; 26.
  • 23. Wölfel R, Corman VM, Guggemos W, Seilmaier M, Zange S, Müller MA, et al. Virological assessment of hospitalized patients with COVID-2019. Nature. 2020; Epub ahead of print.
  • 24. Interim Guidelines for COVID-19 Antibody Testing; cdc.gov; Advance online publication.
  • 25. Guo, L., Ren, L., Yang, S., Xiao, M., Chang, D., Yang, F., Dela Cruz, C. S., Wang, Y., Wu, C., Xiao, Y., Zhang, L., Han, L., Dang, S., Xu, Y., Yang, Q., Xu, S., Zhu, H., Xu, Y., Jin, Q., Sharma, L., … Wang, J. (2020). Profiling Early Humoral Response to Diagnose Novel Coronavirus Disease (COVID-19). Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa310. Advance online publication.
  • 26. Zhao, J., Yuan, Q., Wang, H., Liu, W., Liao, X., Su, Y., Wang, X., Yuan, J., Li, T., Li, J., Qian, S., Hong, C., Wang, F., Liu, Y., Wang, Z., He, Q., Li, Z., He, B., Zhang, T., Fu, Y., … Zhang, Z. (2020). Antibody responses to SARS-CoV-2 in patients of novel coronavirus disease 2019. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, ciaa344. Advance online publication.
Toplam 26 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Klinik Tıp Bilimleri
Bölüm Makaleler
Yazarlar

Abdurrahman Sarmış 0000-0002-8156-6633

Yayımlanma Tarihi 5 Ağustos 2020
Gönderilme Tarihi 23 Haziran 2020
Yayımlandığı Sayı Yıl 2020 Cilt: 3 Sayı: Özel Sayı

Kaynak Göster

Vancouver Sarmış A. Laboratory Diagnosis of COVID-19, a Review of Literature. MRR. 2020;3(Özel Sayı):3-10.