EN
ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE
Abstract
Routine monitoring of microalgal growth requires the use of one of several methods such as cell counting under the microscope and measuring optical density (OD) with a spectrophotometer. Each of these methods has their advantages and disadvantages. For example, counting cells under the microscope can be time consuming, but it provides the best estimate of cell growth. Measuring OD is much quicker, however it doesn’t provide any information on cell numbers and debris in culture can interfere with OD measurements. Therefore, this study aimed to demonstrate the usefulness of an image processing approach for counting cells in a microalga culture. Results showed that highest correlations were observed between Utermöhl cell counts and OD measurements (r=0.99), ImageJ cell counts and OD measurements (r=0.99) and between Utermöhl and ImageJ cell counts (r=0.99). In the regression analysis, highest R2 values were obtained for Utermöhl vs OD (R2=0.99) and ImageJ vs OD (R2=0.99). Counting algal cells with ImageJ allows the analyst to complete the procedure 4 times faster than with manual Utermöhl procedure.
Keywords
References
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Details
Primary Language
English
Subjects
Hydrobiology
Journal Section
Research Article
Publication Date
May 31, 2020
Submission Date
December 14, 2019
Acceptance Date
May 7, 2020
Published in Issue
Year 2020 Volume: 3 Number: 2
APA
Dökümcüoğlu, V. E., & Yılmaz, M. (2020). ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. Mediterranean Fisheries and Aquaculture Research, 3(2), 75-81. https://doi.org//medfar.v3i54660.659398
AMA
1.Dökümcüoğlu VE, Yılmaz M. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020;3(2):75-81. doi:/medfar.v3i54660.659398
Chicago
Dökümcüoğlu, Vesile Esra, and Mete Yılmaz. 2020. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research 3 (2): 75-81. https://doi.org//medfar.v3i54660.659398.
EndNote
Dökümcüoğlu VE, Yılmaz M (May 1, 2020) ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. Mediterranean Fisheries and Aquaculture Research 3 2 75–81.
IEEE
[1]V. E. Dökümcüoğlu and M. Yılmaz, “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”, MedFAR, vol. 3, no. 2, pp. 75–81, May 2020, doi: /medfar.v3i54660.659398.
ISNAD
Dökümcüoğlu, Vesile Esra - Yılmaz, Mete. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research 3/2 (May 1, 2020): 75-81. https://doi.org//medfar.v3i54660.659398.
JAMA
1.Dökümcüoğlu VE, Yılmaz M. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020;3:75–81.
MLA
Dökümcüoğlu, Vesile Esra, and Mete Yılmaz. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research, vol. 3, no. 2, May 2020, pp. 75-81, doi:/medfar.v3i54660.659398.
Vancouver
1.Vesile Esra Dökümcüoğlu, Mete Yılmaz. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020 May 1;3(2):75-81. doi:/medfar.v3i54660.659398