Research Article

ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE

Volume: 3 Number: 2 May 31, 2020
EN

ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE

Abstract

Routine monitoring of microalgal growth requires the use of one of several methods such as cell counting under the microscope and measuring optical density (OD) with a spectrophotometer. Each of these methods has their advantages and disadvantages. For example, counting cells under the microscope can be time consuming, but it provides the best estimate of cell growth. Measuring OD is much quicker, however it doesn’t provide any information on cell numbers and debris in culture can interfere with OD measurements. Therefore, this study aimed to demonstrate the usefulness of an image processing approach for counting cells in a microalga culture. Results showed that highest correlations were observed between Utermöhl cell counts and OD measurements (r=0.99), ImageJ cell counts and OD measurements (r=0.99) and between Utermöhl and ImageJ cell counts (r=0.99). In the regression analysis, highest R2 values were obtained for Utermöhl vs OD (R2=0.99) and ImageJ vs OD (R2=0.99). Counting algal cells with ImageJ allows the analyst to complete the procedure 4 times faster than with manual Utermöhl procedure.

Keywords

References

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Details

Primary Language

English

Subjects

Hydrobiology

Journal Section

Research Article

Publication Date

May 31, 2020

Submission Date

December 14, 2019

Acceptance Date

May 7, 2020

Published in Issue

Year 2020 Volume: 3 Number: 2

APA
Dökümcüoğlu, V. E., & Yılmaz, M. (2020). ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. Mediterranean Fisheries and Aquaculture Research, 3(2), 75-81. https://doi.org//medfar.v3i54660.659398
AMA
1.Dökümcüoğlu VE, Yılmaz M. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020;3(2):75-81. doi:/medfar.v3i54660.659398
Chicago
Dökümcüoğlu, Vesile Esra, and Mete Yılmaz. 2020. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research 3 (2): 75-81. https://doi.org//medfar.v3i54660.659398.
EndNote
Dökümcüoğlu VE, Yılmaz M (May 1, 2020) ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. Mediterranean Fisheries and Aquaculture Research 3 2 75–81.
IEEE
[1]V. E. Dökümcüoğlu and M. Yılmaz, “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”, MedFAR, vol. 3, no. 2, pp. 75–81, May 2020, doi: /medfar.v3i54660.659398.
ISNAD
Dökümcüoğlu, Vesile Esra - Yılmaz, Mete. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research 3/2 (May 1, 2020): 75-81. https://doi.org//medfar.v3i54660.659398.
JAMA
1.Dökümcüoğlu VE, Yılmaz M. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020;3:75–81.
MLA
Dökümcüoğlu, Vesile Esra, and Mete Yılmaz. “ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE”. Mediterranean Fisheries and Aquaculture Research, vol. 3, no. 2, May 2020, pp. 75-81, doi:/medfar.v3i54660.659398.
Vancouver
1.Vesile Esra Dökümcüoğlu, Mete Yılmaz. ASSESSMENT OF CELL COUNTING METHOD BASED ON IMAGE PROCESSING FOR A MICROALGA CULTURE. MedFAR. 2020 May 1;3(2):75-81. doi:/medfar.v3i54660.659398

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