TR
EN
Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques
Abstract
In this study, we introduce a cutting-edge methodology for detecting branching and endpoints in two-dimensional brain vessel images, employing deep learning-based object detection techniques. While conventional image processing methods are viable alternatives, our adoption of deep learning showcases notable advancements in accuracy and efficiency. Following meticulous cleaning and labeling of the raw dataset sourced from laboratory environments, we meticulously convert it into the COCO format, ensuring compatibility with deep learning algorithms for both training and testing phases. Utilizing four deep learning object detection methods: fast R-CNN, faster R-CNN, RetinaNet and RPN within the Detectron2 framework, our study achieves remarkable results. Evaluation using the intersection over union (IoU) method underscores the robust performance of our deep learning approach, boasting a success rate surpassing 90%. This breakthrough not only enhances neuroimaging analysis but also holds immense potential for revolutionizing diagnostic and research practices in neurovascular studies.
Keywords
Supporting Institution
Fatih Sultan Mehmet Vakif University
Project Number
22022B1Ç01D
Ethical Statement
This work is supported by Fatih Sultan Mehmet Vakif University Scientific Research Projects Coordination Unit under grant number 22022B1Ç01D
Thanks
Thanks to Fatih Sultan Mehmet Vakif University
References
- [1] M. I. Todorov et al., “Automated analysis of whole brain vasculature using machine learning,” bioRxiv, pp. 0–34, (2019).
- [2] L. Y. Zhang et al., “CLARITY for high-resolution imaging and quantification of vasculature in the whole mouse brain,” Aging Dis, vol. 9, no. 2, pp. 262–272, (2018).
- [3] E. Özkan et al., “Hyperglycemia with or without insulin resistance triggers different structural changes in brain microcirculation and perivascular matrix,” Metab Brain Dis, vol. 38, no. 1, pp. 307–321, (2023).
- [4] S. Bollmann et al., “Imaging of the pial arterial vasculature of the human brain in vivo using highresolution 7T time-of-flight angiography,” Elife, vol. 11, pp. 1–35, (2022).
- [5] S. D. and A. C. and A. S. and G.-W. J. and V. I. and R. K. D. and C. Sarah. J. McGarry, “Vessel Metrics: A python based software tool for automated analysis of vascular structure in confocal imaging,” bioRxiv, vol. 151, no. 0026–2862, p. 104610, (2022).
- [6] Z. Gu et al., “CE-Net: Context Encoder Network for 2D Medical Image Segmentation,” IEEE Transactions on Medical Imaging, vol. 38, no. 10. pp. 2281–2292, (2019).
- [7] E. Zudaire, L. Gambardella, C. Kurcz, and S. Vermeren, “A computational tool for quantitative analysis of vascular networks,” PLoS One, vol. 6, no. 11, pp. 1–12, (2011).
- [8] A. Bhuiyan, B. Nath, and K. Ramamohanarao, “Detection and classification of bifurcation and branch points on retinal vascular network,” 2012 International Conference on Digital Image Computing Techniques and Applications (DICTA), pp. 1–8, (2012).
Details
Primary Language
English
Subjects
Deep Learning, Machine Vision , Biomedical Imaging
Journal Section
Research Article
Early Pub Date
September 4, 2024
Publication Date
March 27, 2025
Submission Date
June 2, 2024
Acceptance Date
September 1, 2024
Published in Issue
Year 2025 Volume: 28 Number: 2
APA
Kaya, S., Kiraz, B., & Çamurcu, A. Y. (2025). Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques. Politeknik Dergisi, 28(2), 639-648. https://doi.org/10.2339/politeknik.1492002
AMA
1.Kaya S, Kiraz B, Çamurcu AY. Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques. Politeknik Dergisi. 2025;28(2):639-648. doi:10.2339/politeknik.1492002
Chicago
Kaya, Samet, Berna Kiraz, and Ali Yılmaz Çamurcu. 2025. “Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques”. Politeknik Dergisi 28 (2): 639-48. https://doi.org/10.2339/politeknik.1492002.
EndNote
Kaya S, Kiraz B, Çamurcu AY (March 1, 2025) Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques. Politeknik Dergisi 28 2 639–648.
IEEE
[1]S. Kaya, B. Kiraz, and A. Y. Çamurcu, “Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques”, Politeknik Dergisi, vol. 28, no. 2, pp. 639–648, Mar. 2025, doi: 10.2339/politeknik.1492002.
ISNAD
Kaya, Samet - Kiraz, Berna - Çamurcu, Ali Yılmaz. “Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques”. Politeknik Dergisi 28/2 (March 1, 2025): 639-648. https://doi.org/10.2339/politeknik.1492002.
JAMA
1.Kaya S, Kiraz B, Çamurcu AY. Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques. Politeknik Dergisi. 2025;28:639–648.
MLA
Kaya, Samet, et al. “Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques”. Politeknik Dergisi, vol. 28, no. 2, Mar. 2025, pp. 639-48, doi:10.2339/politeknik.1492002.
Vancouver
1.Samet Kaya, Berna Kiraz, Ali Yılmaz Çamurcu. Branch and End Points Detection in Cerebral Vessels Images Using Deep Learning Object Detection Techniques. Politeknik Dergisi. 2025 Mar. 1;28(2):639-48. doi:10.2339/politeknik.1492002