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Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi

Yıl 2010, Cilt: 7 Sayı: 1, 65 - 70, 01.03.2010

Öz

Sekiz lepistes varyetesi içeren 64 birey genetik analiz için kullanıldı. Genomik DNA kas dokusundan ekstrakte
edildi. Her örneğine ait genomik DNA RAPD tekniği kullanılarak incelendi. Dokuz primer RAPD-PCR'da
çalıştırıldı. Bu primerlerden sekiz tanesinde band tespit edildi. Varyeteler içi ve varyeteler arası genetik benzerlik
ve farklılık hesaplandı. King ve flamingo arasındaki genetik farklılık en yüksek bulundu (0.604). Tüm
varyetelerin genetik benzerlikleri oldukça yüksek olarak bulundu (minimum 0.670, maksimum 0.948).

Kaynakça

  • Akhan, S., 2003, Üç farklı kuluçkahanedeki damızlık
  • Foo C.L., Dinesh K.R., Lim T.M., Chan W.K., Phang, V.P.E.,
  • gökkuşağı alabalığı (Oncorhynchus mykiss Walbaum,
  • ) stokları arasında genetik çeşitliliğin RAPD-PCR
  • yöntemiyle belirlenmesi üzerine bir araştırma, Ege
  • Üniversitesi Fen Bilimleri Enstitüsü Doktora Tezi, İzmir. 1995, Inheritance of RAPD markers in the guppy fish, Poecilia reticulata, Zoological Sciences, 12: 535-541.
  • Goldberg D., Jackson K., Yehuda Y., Degani, G., 2000, Application of RAPD in the study of variations between African and American Cichlidae, Indian Journal Fisheries, 46: 307-312. Yayıncılık, İzmir.
  • Hirschfeld D., Dhar A.K., Rask K., Alcivar-Warren, A.,
  • Bardakcı F., Skibinski, D.O.F., 1994, Application of the
  • , Genetic diversity in the eastern oyster
  • (Crassostrea virginica) from Massachusetts using
  • RAPD technique, Journal of Shellfish Research, 18: 121-125.
  • Barman H.K., Barat A., Yadav B.M., Banerjee S., Meher P.K., Reddy P.V.G.K., Jana, R.K., 2003, Genetic variation between four species of Indian major carps as
  • Khoo G., Lim K.F., Gan D.K.Y., Chen F., Chan W., Lim T.M., Phang, V.P.E., 2002, Genetic diversity within and among feral populations and domesticated strains of guppy (Poecilia reticulata) in Singapore, Marine Biotechnology, 4: 367-378.
  • Khoo G., Lim M.H., Suresh H., Gan D.K.Y., Lim K.F., Chen F., Chan W., Lim T.M., Phang, V.P.E., 2003, Genetic linkage maps of the guppy (Poecilia reticulata): assignment of RAPD markers to multipoint linkage groups, Marine Biotechnology, 5: 279-293.
  • Klinbunga S., Ampayup P., Tassanakajon A., Jarayabhand P., Yoosukh, W., 2000, Development of species- specific markers of the tropical oyster (Crassostrea belcheri) in Thailand, Marine Biotechnology, 2: 476- 484.
  • Koh, T.L., Khoo G., Fan L.Q., Phang, V.P.E., 1999, Genetic diversity among wild forms and cultivated varieties of Discus (Symphysodon spp.) as revealed by Random Amplified Polymorphic DNA (RAPD) fingerprinting, Aquaculture, 173: 485-497.
  • Krane, D.E., Sternberg, D.C., Burton, G.A., 1999, Randomly amplified polymorphic DNA profile-based measures of genetic diversity in crayfish correlated with environmental impacts, Environmental Toxicology and Chemistry, 18: 504-508.
  • Lehmann D., Hettwer H., Taraschewski, H., 2000, RAPD- PCR investigations of systematic relationships among four species of eels (Teleostei:Anguillidae), particularly Anguilla anguilla and A. Rostrat, Marine Biology, 137: 195-204.
  • Leuzzi M.S.P., Almeida F.S., Orsi M.L., Sodre, L.M.K., 2004, Analysis by RAPD of the genetic structure of Astyanax altiparanae (Pisces, Characiformes) in reservoirs on the Paranapanema River, Brazil, Genetics and Molecular Biology, 27: 355-362.
  • Liu Z., Li P., Argue B.J., Dunham, R.A., 1998, Inheritance of RAPD markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F , F and backcross hybrids, Animal Genetics, 29: 58-62. 12
  • Liu Z.J., Li P., Argue B.J., Dunham, R.A., 1999, Random amplified polymorphic DNA markers: usefulness for gene mapping and analysis of genetic variation of catfish, Aquaculture, 174: 59-68.
  • Nei M., Li, W.H., 1979, Mathematical model for studying genetic variation in terms of restriction endonucleases, Proceedings of the National Academy Sciences, 76: 5269-5273.
  • Partis L., Wells, R.J., 1996, Identification of fish species using random amplified polymorphic DNA (RAPD), Molecular and Cellular Probes, 10: 435-441.
  • Shikano, T., Taniguchi, N., 2002, Using microsatellite and RAPD markers to estimate the amount of heterosis in various strain combinations in the guppy (Poecilia reticulata) as a fish model, Aquaculture, 204: 271-281.
  • Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., Tingey, S.V., 1990, DNA polymorphisms amplified by arbitrary primers are useful as genetic markers, Nucleic Acids Research, 18: 6531-6535. Geliş Tarihi Kabul Tarihi : 25.02.2010
  • Copyright of Journal of Adnan Menderes University, Agricultural Faculty is the property of Adnan Menderes
  • University and its content may not be copied or emailed to multiple sites or posted to a listserv without the
  • copyright holder's express written permission. However, users may print, download, or email articles for individual use.

ESTIMATION OF GENETIC DIFFERENCES AMONG GUPPIES, Poecilia reticulata by RAPD MARKERS

Yıl 2010, Cilt: 7 Sayı: 1, 65 - 70, 01.03.2010

Öz

Sixty-four individuals that comprise 8 guppy varieties were used for genetic analysis. Genomic DNA of each individual was extracted from muscle tissues. DNA structure of each sample was examined by using random amplification of polymorphic DNA technique. Nine primers were worked in RAPD-polymerase chain reaction. Seven of them worked well having bands. Genetic similarities and differences for intraspecies and interspecies were calculated. Genetic difference between king and flamingo was the highest (0.604). Genetic similarities of all varieties were determined quietly high (minimum 0.670, maximum 0.948).

Kaynakça

  • Akhan, S., 2003, Üç farklı kuluçkahanedeki damızlık
  • Foo C.L., Dinesh K.R., Lim T.M., Chan W.K., Phang, V.P.E.,
  • gökkuşağı alabalığı (Oncorhynchus mykiss Walbaum,
  • ) stokları arasında genetik çeşitliliğin RAPD-PCR
  • yöntemiyle belirlenmesi üzerine bir araştırma, Ege
  • Üniversitesi Fen Bilimleri Enstitüsü Doktora Tezi, İzmir. 1995, Inheritance of RAPD markers in the guppy fish, Poecilia reticulata, Zoological Sciences, 12: 535-541.
  • Goldberg D., Jackson K., Yehuda Y., Degani, G., 2000, Application of RAPD in the study of variations between African and American Cichlidae, Indian Journal Fisheries, 46: 307-312. Yayıncılık, İzmir.
  • Hirschfeld D., Dhar A.K., Rask K., Alcivar-Warren, A.,
  • Bardakcı F., Skibinski, D.O.F., 1994, Application of the
  • , Genetic diversity in the eastern oyster
  • (Crassostrea virginica) from Massachusetts using
  • RAPD technique, Journal of Shellfish Research, 18: 121-125.
  • Barman H.K., Barat A., Yadav B.M., Banerjee S., Meher P.K., Reddy P.V.G.K., Jana, R.K., 2003, Genetic variation between four species of Indian major carps as
  • Khoo G., Lim K.F., Gan D.K.Y., Chen F., Chan W., Lim T.M., Phang, V.P.E., 2002, Genetic diversity within and among feral populations and domesticated strains of guppy (Poecilia reticulata) in Singapore, Marine Biotechnology, 4: 367-378.
  • Khoo G., Lim M.H., Suresh H., Gan D.K.Y., Lim K.F., Chen F., Chan W., Lim T.M., Phang, V.P.E., 2003, Genetic linkage maps of the guppy (Poecilia reticulata): assignment of RAPD markers to multipoint linkage groups, Marine Biotechnology, 5: 279-293.
  • Klinbunga S., Ampayup P., Tassanakajon A., Jarayabhand P., Yoosukh, W., 2000, Development of species- specific markers of the tropical oyster (Crassostrea belcheri) in Thailand, Marine Biotechnology, 2: 476- 484.
  • Koh, T.L., Khoo G., Fan L.Q., Phang, V.P.E., 1999, Genetic diversity among wild forms and cultivated varieties of Discus (Symphysodon spp.) as revealed by Random Amplified Polymorphic DNA (RAPD) fingerprinting, Aquaculture, 173: 485-497.
  • Krane, D.E., Sternberg, D.C., Burton, G.A., 1999, Randomly amplified polymorphic DNA profile-based measures of genetic diversity in crayfish correlated with environmental impacts, Environmental Toxicology and Chemistry, 18: 504-508.
  • Lehmann D., Hettwer H., Taraschewski, H., 2000, RAPD- PCR investigations of systematic relationships among four species of eels (Teleostei:Anguillidae), particularly Anguilla anguilla and A. Rostrat, Marine Biology, 137: 195-204.
  • Leuzzi M.S.P., Almeida F.S., Orsi M.L., Sodre, L.M.K., 2004, Analysis by RAPD of the genetic structure of Astyanax altiparanae (Pisces, Characiformes) in reservoirs on the Paranapanema River, Brazil, Genetics and Molecular Biology, 27: 355-362.
  • Liu Z., Li P., Argue B.J., Dunham, R.A., 1998, Inheritance of RAPD markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F , F and backcross hybrids, Animal Genetics, 29: 58-62. 12
  • Liu Z.J., Li P., Argue B.J., Dunham, R.A., 1999, Random amplified polymorphic DNA markers: usefulness for gene mapping and analysis of genetic variation of catfish, Aquaculture, 174: 59-68.
  • Nei M., Li, W.H., 1979, Mathematical model for studying genetic variation in terms of restriction endonucleases, Proceedings of the National Academy Sciences, 76: 5269-5273.
  • Partis L., Wells, R.J., 1996, Identification of fish species using random amplified polymorphic DNA (RAPD), Molecular and Cellular Probes, 10: 435-441.
  • Shikano, T., Taniguchi, N., 2002, Using microsatellite and RAPD markers to estimate the amount of heterosis in various strain combinations in the guppy (Poecilia reticulata) as a fish model, Aquaculture, 204: 271-281.
  • Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., Tingey, S.V., 1990, DNA polymorphisms amplified by arbitrary primers are useful as genetic markers, Nucleic Acids Research, 18: 6531-6535. Geliş Tarihi Kabul Tarihi : 25.02.2010
  • Copyright of Journal of Adnan Menderes University, Agricultural Faculty is the property of Adnan Menderes
  • University and its content may not be copied or emailed to multiple sites or posted to a listserv without the
  • copyright holder's express written permission. However, users may print, download, or email articles for individual use.
Toplam 29 adet kaynakça vardır.

Ayrıntılar

Diğer ID JA83EZ68EC
Bölüm Araştırma
Yazarlar

Semra Küçük Bu kişi benim

Yayımlanma Tarihi 1 Mart 2010
Yayımlandığı Sayı Yıl 2010 Cilt: 7 Sayı: 1

Kaynak Göster

APA Küçük, S. (2010). Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi. Adnan Menderes Üniversitesi Ziraat Fakültesi Dergisi, 7(1), 65-70.
AMA Küçük S. Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi. ADÜ ZİRAAT DERG. Haziran 2010;7(1):65-70.
Chicago Küçük, Semra. “Lepistes Varyeteleri, Poecilia Reticulata Arasındaki Genetik Farklılığın RAPD Markerlar Ile İncelenmesi”. Adnan Menderes Üniversitesi Ziraat Fakültesi Dergisi 7, sy. 1 (Haziran 2010): 65-70.
EndNote Küçük S (01 Haziran 2010) Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi. Adnan Menderes Üniversitesi Ziraat Fakültesi Dergisi 7 1 65–70.
IEEE S. Küçük, “Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi”, ADÜ ZİRAAT DERG, c. 7, sy. 1, ss. 65–70, 2010.
ISNAD Küçük, Semra. “Lepistes Varyeteleri, Poecilia Reticulata Arasındaki Genetik Farklılığın RAPD Markerlar Ile İncelenmesi”. Adnan Menderes Üniversitesi Ziraat Fakültesi Dergisi 7/1 (Haziran 2010), 65-70.
JAMA Küçük S. Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi. ADÜ ZİRAAT DERG. 2010;7:65–70.
MLA Küçük, Semra. “Lepistes Varyeteleri, Poecilia Reticulata Arasındaki Genetik Farklılığın RAPD Markerlar Ile İncelenmesi”. Adnan Menderes Üniversitesi Ziraat Fakültesi Dergisi, c. 7, sy. 1, 2010, ss. 65-70.
Vancouver Küçük S. Lepistes Varyeteleri, Poecilia reticulata Arasındaki Genetik Farklılığın RAPD Markerlar ile İncelenmesi. ADÜ ZİRAAT DERG. 2010;7(1):65-70.