Araştırma Makalesi

Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector

Cilt: 22 Sayı: 2 10 Nisan 2020
  • Nelin Hacıoğlu
  • Feray Köçkar *
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Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector

Öz

Suicide gene therapy has recently emerged as a method used in cancer treatments. These therapies utilized enzymes that are expressed in the cell. In this study, Staphylococcus saprophyticus supsp. saprophyticus Nitroreductase gene (Ssap-NtrB) was subcloned into the eukaryotic expression vector namely pcDNA3.1 / V5 / His B. For this purpose, Nitroreductase gene region was firstly amplified from the pET14B vector using PCR strategy and cloned into the pGEM-T-Easy vector. After this step, the Ssap-NtrB gene was restricted with KpnI/ApaI and was ligated into pcDNA3.1 / V5 / His B vector. Recombinant colonies were verified using KpnI/ApaI restriction enzymes. As a result, the Ssap-NtrB gene was cloned into pcDNA3.1/V5/His B vector and was readyfor use in suicide gene therapy in eukaryotic human cancer cells.

Anahtar Kelimeler

Destekleyen Kurum

TUBITAK and partially Balikesir University

Proje Numarası

110T754,113Z706 and 2017–024

Teşekkür

The study was supported by the Scientific and Technological Research Council of Turkey-TUBITAK (Grant No. 110T754 and 113Z706) and partially Balikesir University Research Project (2017–024).

Kaynakça

  1. Race, P.R., Lovering AL, White SA, Grove JI, Searle PF, Wrighton CW ve Hyde EI., Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone reversed binding orientations in different redox states of the enzyme, Journal of Biological Chemistry, 280(14), 13256-13264, (2005).
  2. Race, P.R., Lovering AL, White SA, Grove JI, Searle PF, Wrighton CW ve Hyde EI., Kinetic and structural characterisation of Escherichia coli nitroreductase mutants showing improved efficacy for the prodrug substrate CB1954, Journal of molecular biology, 368(2), 481-492, (2007).
  3. Bryant, C.ve McElroy, W., Chemistry and biochemistry of flavoenzymes, CRC Press Boca Raton, FL, pp. 295-297,(1991).
  4. Bryant, D., McCalla, D., Leeksma, M. ve Laneuville, P., Type I nitroreductases of Escherichia coli, Canadian Journal of Microbiology, 27(1), 81-86, (1981).
  5. Goodwin, A., Kersulyte D, Sisson G, Veldhuyzen van Zanten SJ, Berg DE ve Hoffman PS, Metronidazole resistance in Helicobacter pylori is due to null mutations in a gene (rdxA) that encodes an oxygen‐insensitive NADPH nitroreductase, Molecular microbiology, 28(2), 383-393, (1998).
  6. Zenno, S., Koike H, Kumar AN, Jayaraman R, Tanokura M ve Saigo K., Biochemical characterization of NfsA, the Escherichia coli major nitroreductase exhibiting a high amino acid sequence homology to Frp, a Vibrio harveyi flavin oxidoreductase, Journal of bacteriology, 178(15), 4508-4514, (1996).
  7. Zenno, S., Kobori, T., Tanokura, M. ve SAIGO, K., "Purification and characterization of NfrA1, a Bacillus subtilis nitro/flavin reductase capable of interacting with the bacterial luciferase, Bioscience, biotechnology, and biochemistry, 62(10), 1978-1987, (1998).
  8. Zenno, S., Saigo, K., Kanoh, H. ve Inouye, S., Identification of the gene encoding the major NAD (P) H-flavin oxidoreductase of the bioluminescent bacterium Vibrio fischeri ATCC 7744, Journal of bacteriology, 176(12), 3536-3543, (1994).

Ayrıntılar

Birincil Dil

İngilizce

Konular

-

Bölüm

Araştırma Makalesi

Yazarlar

Nelin Hacıoğlu Bu kişi benim
0000-0001-7884-7971
Türkiye

Feray Köçkar * Bu kişi benim
0000-0003-2572-8391
Türkiye

Yayımlanma Tarihi

10 Nisan 2020

Gönderilme Tarihi

27 Kasım 2019

Kabul Tarihi

24 Ocak 2020

Yayımlandığı Sayı

Yıl 2020 Cilt: 22 Sayı: 2

Kaynak Göster

APA
Hacıoğlu, N., & Köçkar, F. (2020). Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector. Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Dergisi, 22(2), 547-554. https://doi.org/10.25092/baunfbed.718256
AMA
1.Hacıoğlu N, Köçkar F. Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector. BAUN Fen. Bil. Enst. Dergisi. 2020;22(2):547-554. doi:10.25092/baunfbed.718256
Chicago
Hacıoğlu, Nelin, ve Feray Köçkar. 2020. “Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector”. Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Dergisi 22 (2): 547-54. https://doi.org/10.25092/baunfbed.718256.
EndNote
Hacıoğlu N, Köçkar F (01 Nisan 2020) Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector. Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Dergisi 22 2 547–554.
IEEE
[1]N. Hacıoğlu ve F. Köçkar, “Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector”, BAUN Fen. Bil. Enst. Dergisi, c. 22, sy 2, ss. 547–554, Nis. 2020, doi: 10.25092/baunfbed.718256.
ISNAD
Hacıoğlu, Nelin - Köçkar, Feray. “Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector”. Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Dergisi 22/2 (01 Nisan 2020): 547-554. https://doi.org/10.25092/baunfbed.718256.
JAMA
1.Hacıoğlu N, Köçkar F. Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector. BAUN Fen. Bil. Enst. Dergisi. 2020;22:547–554.
MLA
Hacıoğlu, Nelin, ve Feray Köçkar. “Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector”. Balıkesir Üniversitesi Fen Bilimleri Enstitüsü Dergisi, c. 22, sy 2, Nisan 2020, ss. 547-54, doi:10.25092/baunfbed.718256.
Vancouver
1.Nelin Hacıoğlu, Feray Köçkar. Cloning of the Ssap-NtrB prokaryotic gene into the eukaryotic expression vector pcDNA3.1 / V5 / His B vector. BAUN Fen. Bil. Enst. Dergisi. 01 Nisan 2020;22(2):547-54. doi:10.25092/baunfbed.718256