Araştırma Makalesi

Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers

Cilt: 15 Sayı: 3 30 Aralık 2022
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Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers

Öz

Plant landraces are heterogeneous plant populations that have adapted to local environmental conditions and serve as a source of genetic variations that can be used for the breeding perspectives. Studies regarding genetic diversity assessment are very important as they provide an opportunity for the scientific community to investigate novel genetic variations for the genetic improvement of crops. Maize is one of the most important cereal crops and provides daily calories to millions of people all over the world. This study aimed to investigate the genetic diversity and population structure of 32 local maize genotypes collected from the Black Sea Region of Turkey using SSR markers. Molecular characterization was performed using the 14 most polymorphic primers that yielded a total of 42 bands. An average of 3 alleles per SSR primer was detected, and the number of alleles varied from 1 (phi022) to 6 (umc1571). The unweighted pair-group method with arithmetic means (UPGMA) clustering divided maize accessions into three main populations. According to Nei's genetic distances, DZ-M-145 (Corum) and DZ-M-20 (Trabzon) genotypes were the closest (0.03) genetically related populations, while DZ-M-68 (Artvin) and DZ-M-55 (Rize) were the most genetically distant (0.63) populations. The study identified molecular genetic diversity not mentioned for maize plants from the Black Sea. On this occasion, new opportunities have been created for hybrid maize products.

Anahtar Kelimeler

Destekleyen Kurum

Dicle University Scientific Research Project Coordination

Proje Numarası

ZIRAAT.16.006.

Kaynakça

  1. Aci, M. M., Lupini, A., Mauceri, A., Morsli, A., Khelifi, L., Sunseri, F., (2018). Genetic variation and structure of maize populations from Saoura and Gourara oasis in Algerian Sahara. BMC genetics, 19(1), 51.
  2. Al-Badeiry, N. A. H., Al-Saadi, A. H., Merza, T. K., (2014). Analysis of Genetic Diversity in Maize (Zea mays L.) Varieties Using SimpleSequence Repeat (SSR) Markers. J. Babylon Uni. Pure Appl. Sci. 22(6):1768-1776.
  3. Avramova, V., AbdElgawad, H., Zhang, Z., Fotschki, B., Casadevall, R., Vergauwen, L., ... & Beemster, G. T., (2015). Drought induces distinct growth response, protection, and recovery mechanisms in the maize leaf growth zone. Plant physiology, 169(2), 1382-1396.
  4. Baloch, F.S., Alsaleh, A, Andeden, E.E., Hatipoglu, R, Nachit, M, Ozkan, H., (2016). High levels of segregation distortion in the Molecular linkage map of bread wheat representing West Asia and NorthAfrica region. Turk J Agric For. 40:352–364
  5. Baloch, F.S., Alsaleh, A., de Miera, L.E.S., Hatipoglu, R., Ciftci, V., Karakoy, T., Yıldız, M., Ozkan, H., (2015). DNA based iPBS-retrotransposon markers for investigating the population structure of pea (Pisumsativum) germplasm from Turkey. Biochem Syst Ecol 61:244–252
  6. Barcaccia, G., Lucchin, M., Parrini, P., (2003). Characterization of a flint maize (Zea mays var. indurata) Italian landrace, II. Genetic diversity and relatedness assessed by SSR and Inter-SSR molecular markers. Genetic Resources and Crop Evolution, 50(3), 253-271.
  7. Belalia, N., Lupini, A., Djemel, A., Morsli, A., Mauceri, A., Lotti, C., ... & Sunseri, F., (2019). Analysis of genetic diversity and population structure in Saharan maize (Zea mays L.) populations using phenotypic traits and SSR markers. Genetic Resources and Crop Evolution, 66(1), 243-257.
  8. Boopathi, N.M., (2013). Genetic mapping and marker assisted selection: basics, practice and benefits. Springer, New Delhi.

Ayrıntılar

Birincil Dil

İngilizce

Konular

Mühendislik

Bölüm

Araştırma Makalesi

Yayımlanma Tarihi

30 Aralık 2022

Gönderilme Tarihi

10 Haziran 2022

Kabul Tarihi

27 Temmuz 2022

Yayımlandığı Sayı

Yıl 2022 Cilt: 15 Sayı: 3

Kaynak Göster

APA
Baran, N., Nadeem, M. A., Yılmaz, A., Andırman, M., Kurt, F., Temiz, G., & Baloch, F. (2022). Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers. Erzincan University Journal of Science and Technology, 15(3), 953-963. https://doi.org/10.18185/erzifbed.1128788
AMA
1.Baran N, Nadeem MA, Yılmaz A, vd. Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers. Erzincan University Journal of Science and Technology. 2022;15(3):953-963. doi:10.18185/erzifbed.1128788
Chicago
Baran, Nurettin, Muhammad Azhar Nadeem, Abdurrahim Yılmaz, vd. 2022. “Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers”. Erzincan University Journal of Science and Technology 15 (3): 953-63. https://doi.org/10.18185/erzifbed.1128788.
EndNote
Baran N, Nadeem MA, Yılmaz A, Andırman M, Kurt F, Temiz G, Baloch F (01 Aralık 2022) Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers. Erzincan University Journal of Science and Technology 15 3 953–963.
IEEE
[1]N. Baran vd., “Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers”, Erzincan University Journal of Science and Technology, c. 15, sy 3, ss. 953–963, Ara. 2022, doi: 10.18185/erzifbed.1128788.
ISNAD
Baran, Nurettin - Nadeem, Muhammad Azhar - Yılmaz, Abdurrahim - Andırman, Mehtap - Kurt, Fırat - Temiz, Gültekin - Baloch, Faheem. “Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers”. Erzincan University Journal of Science and Technology 15/3 (01 Aralık 2022): 953-963. https://doi.org/10.18185/erzifbed.1128788.
JAMA
1.Baran N, Nadeem MA, Yılmaz A, Andırman M, Kurt F, Temiz G, Baloch F. Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers. Erzincan University Journal of Science and Technology. 2022;15:953–963.
MLA
Baran, Nurettin, vd. “Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers”. Erzincan University Journal of Science and Technology, c. 15, sy 3, Aralık 2022, ss. 953-6, doi:10.18185/erzifbed.1128788.
Vancouver
1.Nurettin Baran, Muhammad Azhar Nadeem, Abdurrahim Yılmaz, Mehtap Andırman, Fırat Kurt, Gültekin Temiz, Faheem Baloch. Exploring Genetic Diversity and Population Structure of Turkish Black Sea Region Maize (Zea mays L.) Germplasm using SSR Markers. Erzincan University Journal of Science and Technology. 01 Aralık 2022;15(3):953-6. doi:10.18185/erzifbed.1128788

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