Araştırma Makalesi
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Kolinesteraz ve Ferroptosis'in Çift İnhibitörü Olarak Keşfedilmemiş Doğal Bileşikler: Yedi Biyoaktif Fitokimyasal Üzerine Nöroprotektif Bir Bakış Açısı

Yıl 2026, Cilt: 8 Sayı: 1, 65 - 74, 28.02.2026
https://doi.org/10.52827/hititmedj.1769503
https://izlik.org/JA39MC97HF

Öz

Amaç: Bu çalışmada, celastrol, pachypodol, hinokitiol, withanone, isobavachalcone, magnolol ve xanthorrhizol olmak üzere yedi doğal bileşiğin AChE ve BChE’ye karşı çift hedefli bağlanma potansiyeli, donepezil ve rivastigmin referans alınarak incelendi.
Gereç ve Yöntem: Moleküler yapılar PubChem veritabanından elde edilerek MMFF94 kuvvet alanı ile enerji minimizasyonu yapıldı. Moleküler kenetleme (docking) analizleri AutoDock Vina kullanılarak insan AChE (PDB ID: 4M0E) ve BChE (PDB ID: 6QAA) üzerinde gerçekleştirildi. Bağlanma afiniteleri ve etkileşim profilleri Discovery Studio Visualizer ile değerlendirildi.
Bulgular: Isobavachalcone (–9.2 kcal/mol) ve magnolol (–8.4 kcal/mol) AChE için yüksek afinite gösterirken, withanone (–9.7 kcal/mol) ve celastrol (–9.6 kcal/mol) BChE’ye güçlü bağlanma potansiyeli sergilemiş ve donepezil ile karşılaştırılabilir sonuçlar vermiştir. Bu bileşikler, hidrojen bağları, π–π etkileşimleri ve hidrofobik temaslar gibi stabilizasyon sağlayan etkileşimler oluşturmuş, minimal sterik çatışma ile enzimlerin aktif bölgelerine yapısal uyumluluk göstermiştir.
Sonuç: Isobavachalcone, magnolol, celastrol ve withanone, umut verici çok işlevli adaylar olarak belirlenmiştir. Çift yönlü kolinesteraz inhibisyonu ve bildirilen antioksidan özellikleri, hem kolinerjik disfonksiyon hem de ferroptozisle ilişkili nörodejenerasyonu hedefleyen yeni tedavi stratejileri için potansiyel taşımaktadır.

Kaynakça

  • Sharma K. Cholinesterase inhibitors as Alzheimer's therapeutics. Molecular Medicine Reports 2019;20(2):1479-1487.
  • Giacobini E. Cholinesterase inhibitors: new roles and therapeutic alternatives. Pharmacological Research 2004;50(4):433-440.
  • Dixon SJ, Lemberg KM, Lamprecht MR, et al. Ferroptosis: an iron-dependent form of nonapoptotic cell death. Cell 2012;149(5):1060-1072.
  • Sethi G, Ahn KS, Aggarwal BB. Targeting nuclear factor-κB activation pathway by thymoquinone: role in suppression of antiapoptotic gene products and enhancement of apoptosis. Molecular Cancer Research 2008;6(6):1059-1070.
  • Kim HP, Son KH, Chang HW, et al. Anti-inflammatory plant flavonoids and cellular action mechanisms. Journal of Pharmacological Sciences 2004;96(3):229-245.
  • Abdul Ghani MA, Ugusman A, Latip J, et al. Role of terpenophenolics in modulating inflammation and apoptosis in cardiovascular diseases: a review. International Journal of Molecular Sciences 2023;24(6):5339.
  • Pandey A, Bani S, Dutt P, et al. Multifunctional neuroprotective effect of Withanone, a compound from Withania somnifera roots in alleviating cognitive dysfunction. Cytokine 2018;102:211-221.
  • Michalkova R, Mirossay L, Gazdova M, et al. Molecular mechanisms of antiproliferative effects of natural chalcones. Cancers 2021;13(11):2730.
  • Zhang J, Chen Z, Huang X, et al. Insights on the multifunctional activities of magnolol. BioMed Research International 2019;2019(1):1847130.
  • Oon SF, Nallappan M, Tee TT, et al. Xanthorrhizol: A review of its pharmacological activities and anticancer properties. Cancer Cell International 2015;15(1):100.
  • Hanwell MD, Curtis DE, Lonie DC, et al. Avogadro: an advanced semantic chemical editor, visualization, and analysis platform. Journal of Cheminformatics 2012;4(1):17.
  • Eberhardt J, Santos-Martins D, Tillack AF, et al. AutoDock Vina 1.2.0: new docking methods, expanded force field, and python bindings. Journal of Chemical Information and Modeling 2021;61(8):3891-3898.
  • Trott O, Olson AJ. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. Journal of Computational Chemistry 2010;31(2):455-461.
  • Wang F-C, Peng B, Cao S-L, et al. Synthesis and cytotoxic activity of chalcone analogues containing a thieno[2,3-d]pyrimidin-2-yl group as the A-ring or B-ring. Bioorganic Chemistry 2020;94:103346.
  • Xian Y-F, Qu C, Liu Y, et al. Magnolol ameliorates behavioral impairments and neuropathology in a transgenic mouse model of Alzheimer’s disease. Oxidative Medicine and Cellular Longevity 2020;2020(1):5920476.
  • Ye Y-H, Li C, Yang J, et al. Construction of an immobilised acetylcholinesterase column and its application in screening insecticidal constituents from Magnolia officinalis. Pest Management Science 2015;71(4):607-615.
  • Hooda P, Malik R, Bhatia S, et al. Phytoimmunomodulators: A review of natural modulators for complex immune system. Heliyon 2024;10(1).
  • Xie Y, Hou W, Song X, et al. Ferroptosis: process and function. Cell Death & Differentiation 2016;23(3):369-379.
  • Syed AA, Reza MI, Singh P, et al. Withania somnifera in neurological disorders: Ethnopharmacological evidence, mechanism of action and its progress in delivery systems. Current Drug Metabolism 2021;22(7):561-571.
  • Ben Bakrim W, El Bouzidi L, Manouze H, et al. Antiamnesic effects of withaferin A, a steroidal lactone isolated from Withania adpressa, on scopolamine-induced memory impairment in mice. Arabian Journal of Chemistry 2022;15(1):103529.
  • Birks JS, Harvey RJ. Donepezil for dementia due to Alzheimer's disease. Cochrane Database of Systematic Reviews 2018;6(6):CD001190.
  • Xi J, Zhang Z, Wang Z, et al. Hinokitiol functions as a ferroptosis inhibitor to confer neuroprotection. Free Radical Biology and Medicine 2022;190:202-215.
  • Li J, Cao F, Yin H-L, et al. Ferroptosis: past, present and future. Cell Death & Disease 2020;11(2):88.
  • Wang F, Wang J, Shen Y, et al. Iron dyshomeostasis and ferroptosis: a new Alzheimer’s disease hypothesis? Frontiers in Aging Neuroscience 2022;14:830569.
  • Skouta R, Dixon SJ, Wang J, et al. Ferrostatins inhibit oxidative lipid damage and cell death in diverse disease models. Journal of the American Chemical Society 2014;136(12):4551-4556.
  • Darvesh S, Hopkins DA, Geula C. Neurobiology of butyrylcholinesterase. Nature Reviews Neuroscience 2003;4(2):131-138.

Unexplored Natural Compounds as Dual Inhibitors of Cholinesterase and Ferroptosis: A Neuroprotective Perspective on Seven Bioactive Phytochemicals

Yıl 2026, Cilt: 8 Sayı: 1, 65 - 74, 28.02.2026
https://doi.org/10.52827/hititmedj.1769503
https://izlik.org/JA39MC97HF

Öz

Objective: This study investigated the dual-target binding potential of seven natural compounds celastrol, pachypodol, hinokitiol, withanone, isobavachalcone, magnolol, and xanthorrhizol against AChE and BChE, using donepezil and rivastigmine as references.
Material and Method: Molecular structures were obtained from PubChem and energy-minimised with the MMFF94 force field. Docking was performed using AutoDock Vina with human AChE (PDB ID: 4M0E) and BChE (PDB ID: 6QAA). Binding affinities and interaction profiles were assessed with Discovery Studio Visualizer.
Results: Isobavachalcone (–9.2 kcal/mol) and magnolol (–8.4 kcal/mol) showed high affinity for AChE, while withanone (–9.7 kcal/mol) and celastrol (–9.6 kcal/mol) strongly bound BChE, comparable to donepezil. These compounds established stabilising interactions, including hydrogen bonds, π–π stacking, and hydrophobic contacts, with minimal steric conflicts, supporting structural compatibility with target enzymes.
Conclusion:Isobavachalcone, magnolol, celastrol, and withanone are identified as promising multifunctional candidates. Their dual cholinesterase inhibition and reported antioxidant properties suggest potential to address both cholinergic dysfunction and ferroptosis-associated neurodegeneration, warranting further experimental validation.

Kaynakça

  • Sharma K. Cholinesterase inhibitors as Alzheimer's therapeutics. Molecular Medicine Reports 2019;20(2):1479-1487.
  • Giacobini E. Cholinesterase inhibitors: new roles and therapeutic alternatives. Pharmacological Research 2004;50(4):433-440.
  • Dixon SJ, Lemberg KM, Lamprecht MR, et al. Ferroptosis: an iron-dependent form of nonapoptotic cell death. Cell 2012;149(5):1060-1072.
  • Sethi G, Ahn KS, Aggarwal BB. Targeting nuclear factor-κB activation pathway by thymoquinone: role in suppression of antiapoptotic gene products and enhancement of apoptosis. Molecular Cancer Research 2008;6(6):1059-1070.
  • Kim HP, Son KH, Chang HW, et al. Anti-inflammatory plant flavonoids and cellular action mechanisms. Journal of Pharmacological Sciences 2004;96(3):229-245.
  • Abdul Ghani MA, Ugusman A, Latip J, et al. Role of terpenophenolics in modulating inflammation and apoptosis in cardiovascular diseases: a review. International Journal of Molecular Sciences 2023;24(6):5339.
  • Pandey A, Bani S, Dutt P, et al. Multifunctional neuroprotective effect of Withanone, a compound from Withania somnifera roots in alleviating cognitive dysfunction. Cytokine 2018;102:211-221.
  • Michalkova R, Mirossay L, Gazdova M, et al. Molecular mechanisms of antiproliferative effects of natural chalcones. Cancers 2021;13(11):2730.
  • Zhang J, Chen Z, Huang X, et al. Insights on the multifunctional activities of magnolol. BioMed Research International 2019;2019(1):1847130.
  • Oon SF, Nallappan M, Tee TT, et al. Xanthorrhizol: A review of its pharmacological activities and anticancer properties. Cancer Cell International 2015;15(1):100.
  • Hanwell MD, Curtis DE, Lonie DC, et al. Avogadro: an advanced semantic chemical editor, visualization, and analysis platform. Journal of Cheminformatics 2012;4(1):17.
  • Eberhardt J, Santos-Martins D, Tillack AF, et al. AutoDock Vina 1.2.0: new docking methods, expanded force field, and python bindings. Journal of Chemical Information and Modeling 2021;61(8):3891-3898.
  • Trott O, Olson AJ. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. Journal of Computational Chemistry 2010;31(2):455-461.
  • Wang F-C, Peng B, Cao S-L, et al. Synthesis and cytotoxic activity of chalcone analogues containing a thieno[2,3-d]pyrimidin-2-yl group as the A-ring or B-ring. Bioorganic Chemistry 2020;94:103346.
  • Xian Y-F, Qu C, Liu Y, et al. Magnolol ameliorates behavioral impairments and neuropathology in a transgenic mouse model of Alzheimer’s disease. Oxidative Medicine and Cellular Longevity 2020;2020(1):5920476.
  • Ye Y-H, Li C, Yang J, et al. Construction of an immobilised acetylcholinesterase column and its application in screening insecticidal constituents from Magnolia officinalis. Pest Management Science 2015;71(4):607-615.
  • Hooda P, Malik R, Bhatia S, et al. Phytoimmunomodulators: A review of natural modulators for complex immune system. Heliyon 2024;10(1).
  • Xie Y, Hou W, Song X, et al. Ferroptosis: process and function. Cell Death & Differentiation 2016;23(3):369-379.
  • Syed AA, Reza MI, Singh P, et al. Withania somnifera in neurological disorders: Ethnopharmacological evidence, mechanism of action and its progress in delivery systems. Current Drug Metabolism 2021;22(7):561-571.
  • Ben Bakrim W, El Bouzidi L, Manouze H, et al. Antiamnesic effects of withaferin A, a steroidal lactone isolated from Withania adpressa, on scopolamine-induced memory impairment in mice. Arabian Journal of Chemistry 2022;15(1):103529.
  • Birks JS, Harvey RJ. Donepezil for dementia due to Alzheimer's disease. Cochrane Database of Systematic Reviews 2018;6(6):CD001190.
  • Xi J, Zhang Z, Wang Z, et al. Hinokitiol functions as a ferroptosis inhibitor to confer neuroprotection. Free Radical Biology and Medicine 2022;190:202-215.
  • Li J, Cao F, Yin H-L, et al. Ferroptosis: past, present and future. Cell Death & Disease 2020;11(2):88.
  • Wang F, Wang J, Shen Y, et al. Iron dyshomeostasis and ferroptosis: a new Alzheimer’s disease hypothesis? Frontiers in Aging Neuroscience 2022;14:830569.
  • Skouta R, Dixon SJ, Wang J, et al. Ferrostatins inhibit oxidative lipid damage and cell death in diverse disease models. Journal of the American Chemical Society 2014;136(12):4551-4556.
  • Darvesh S, Hopkins DA, Geula C. Neurobiology of butyrylcholinesterase. Nature Reviews Neuroscience 2003;4(2):131-138.
Toplam 26 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Tıbbi Biyokimya ve Metabolomik (Diğer)
Bölüm Araştırma Makalesi
Yazarlar

Müslüm Gök 0000-0003-2875-291X

Mehmet Özcan 0000-0002-1222-2802

Çiğdem Çiçek 0000-0001-5481-4438

Veysel Baskın 0000-0002-1733-2621

Gönderilme Tarihi 20 Ağustos 2025
Kabul Tarihi 5 Şubat 2026
Yayımlanma Tarihi 28 Şubat 2026
DOI https://doi.org/10.52827/hititmedj.1769503
IZ https://izlik.org/JA39MC97HF
Yayımlandığı Sayı Yıl 2026 Cilt: 8 Sayı: 1

Kaynak Göster

AMA 1.Gök M, Özcan M, Çiçek Ç, Baskın V. Unexplored Natural Compounds as Dual Inhibitors of Cholinesterase and Ferroptosis: A Neuroprotective Perspective on Seven Bioactive Phytochemicals. Hitit Medical Journal. 2026;8(1):65-74. doi:10.52827/hititmedj.1769503