Araştırma Makalesi

Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study

Cilt: 14 Sayı: 2 1 Haziran 2024
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Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study

Öz

Circadian rhythm is defined biochemical, physiological, metabolic and behavioral responses of all living organisms such as bacteria, mammals, fungi and plants within a 24-hour light and dark photoperiod. In plants, circadian rhythm regulates multiple physiological, metabolic and behavioral processes such as stomatal and leaf movements, stem elongation, enzyme activity and aging. Circadian clock genes are known to play a role in regulating the biosynthesis of phytohormones which are involved in many crucial processes such as seed germination, hypocotyl elongation and photosynthesis. Circadian rhythm regulates and optimizes physiological and molecular mechanisms in a diurnal cycle, anticipating seasonal changes and preparing the plant for different environmental conditions in plant. Circadian rhythm also plays a crucial role in the regulation of plant defense against biotic and abiotic stresses. Melon is a diploid species and one of the most important Cucurbitaceae family members. In this study, we aimed to investigate the relationship between different developmental processes and circadian rhythm in melon. The relationship between circadian rhythm and growth, development and resistance in melon a detailed understanding of the relationship will help to improve future agricultural production and ground for further research on tolerance to environmental stresses will be created.

Anahtar Kelimeler

Kaynakça

  1. Atamian, H. S., Creux, N. M., Brown, E. A., Garner, A. G., Blackman, B. K. & Harmer, S. L. (2016). Circadian regulation of sunflower heliotropism, floral orientation, and pollinator visits. Science, 353(6299), 587-590.
  2. Chervin, C., El-Kereamy, A., Roustan, J. P., Latché, A., Lamon, J. & Bouzayen, M. (2004). Ethylene seems required for the berry development and ripening in grape, a non-climacteric fruit. Plant Science, 167(6), 1301-1305.
  3. Conesa, A., Gotz, S., Garcia-Gomez, J. M., Terol, J., Talon, M. & Robles, M. (2005). Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics, 21(18), 3674-3676.
  4. Farré, E. M., & Weise, S. E. (2012). The interactions between the circadian clock and primary metabolism. Current Opinion in Plant Biology, 15(3), 293-300.
  5. Fujiwara, S., Wang, L., Han, L., Suh, S. S., Salomé, P. A., McClung, C. R. & Somers, D. E. (2008). Post-translational regulation of the Arabidopsis circadian clock through selective proteolysis and phosphorylation of pseudoresponse regulator proteins. Journal of Biological Chemistry, 283(34), 1-11.
  6. Garcia-Mas, J., Benjak, A., Sanseverino, W., Bourgeois, M., Mir, G., González, V. M., Hénaff, E., Câmara, F., Cozzuto, L., Lowy, E., Alioto, T., CapellaGutiérrez, S., Blanca, J., Cañizares, J., Ziarsolo, P., Gonzalez-Ibeas, D., Rodríguez-Moreno, L., Droege, M., Du, L., Alvarez-Tejado, M., LorenteGaldos B, Melé M, Yang L, Weng Y, Navarro A, Marques-Bonet T, Aranda MA, Nuez, F., Picó, B., Gabaldón, T., Roma, G., Guigó, R., Casacuberta, J. M., Arús, P. & Puigdomènech, P. (2012). The genome of melon (Cucumis melo L.). Proceedings of the National Academy of Sciences, 109(29), 11872-11877.
  7. Greenham, K., Sartor, R. C., Zorich, S., Lou, P., Mockler, T. C. & McClung, C. R. (2020). Expansion of the circadian transcriptome in Brassica rapa and genome-wide diversification of paralog expression patterns. eLife https://elifesciences.org/articles/58993.
  8. Grundy, J., Stoker, C. & Carré, I. A. (2015). Circadian regulation of abiotic stress tolerance in plants. Frontiers in Plant Science, 6(648), 1-15.

Ayrıntılar

Birincil Dil

İngilizce

Konular

Toprak Bilimleri ve Bitki Besleme (Diğer)

Bölüm

Araştırma Makalesi

Erken Görünüm Tarihi

28 Mayıs 2024

Yayımlanma Tarihi

1 Haziran 2024

Gönderilme Tarihi

2 Haziran 2023

Kabul Tarihi

20 Şubat 2024

Yayımlandığı Sayı

Yıl 2024 Cilt: 14 Sayı: 2

Kaynak Göster

APA
Gürkök Tan, T., & Derelli Tüfekçi, E. (2024). Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study. Journal of the Institute of Science and Technology, 14(2), 879-887. https://doi.org/10.21597/jist.1309061
AMA
1.Gürkök Tan T, Derelli Tüfekçi E. Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study. Iğdır Üniv. Fen Bil Enst. Der. 2024;14(2):879-887. doi:10.21597/jist.1309061
Chicago
Gürkök Tan, Tugba, ve Ebru Derelli Tüfekçi. 2024. “Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study”. Journal of the Institute of Science and Technology 14 (2): 879-87. https://doi.org/10.21597/jist.1309061.
EndNote
Gürkök Tan T, Derelli Tüfekçi E (01 Haziran 2024) Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study. Journal of the Institute of Science and Technology 14 2 879–887.
IEEE
[1]T. Gürkök Tan ve E. Derelli Tüfekçi, “Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study”, Iğdır Üniv. Fen Bil Enst. Der., c. 14, sy 2, ss. 879–887, Haz. 2024, doi: 10.21597/jist.1309061.
ISNAD
Gürkök Tan, Tugba - Derelli Tüfekçi, Ebru. “Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study”. Journal of the Institute of Science and Technology 14/2 (01 Haziran 2024): 879-887. https://doi.org/10.21597/jist.1309061.
JAMA
1.Gürkök Tan T, Derelli Tüfekçi E. Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study. Iğdır Üniv. Fen Bil Enst. Der. 2024;14:879–887.
MLA
Gürkök Tan, Tugba, ve Ebru Derelli Tüfekçi. “Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study”. Journal of the Institute of Science and Technology, c. 14, sy 2, Haziran 2024, ss. 879-87, doi:10.21597/jist.1309061.
Vancouver
1.Tugba Gürkök Tan, Ebru Derelli Tüfekçi. Transcriptional Regulation of Circadian Rhythm System for Developmental Stages in Cucumis melo L.: A Bioinformatic Study. Iğdır Üniv. Fen Bil Enst. Der. 01 Haziran 2024;14(2):879-87. doi:10.21597/jist.1309061