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Çanakkale Boğazı'ndan Toplanan Müsilajda Siyanobakteri Toplulukları: Metagenomik Yaklaşım

Yıl 2022, , 11 - 18, 20.07.2022
https://doi.org/10.46384/jmsf.1021736

Öz

Bu çalışmada Çanakkale Boğazı'nda üç istasyondan toplanan müsilaj örneklerindeki siyanobakteri toplulukları metagenomik yaklaşımla analiz edilmiştir. Müsilaj örnekleri, Çanakkale Boğazı'nın üç farklı noktasından (İstasyon 1: 40°6'42.78"K, 26°23'57.00"D; İstasyon 2: 40°9'8.09"K, 26°, 24'16.19"D; İstasyon 3: 40°6 '21.62"K, 26°22'41.25"D) Haziran 2021 başında toplanmıştır. Toplam dizi sayısının %87.00'sini oluşturmuş baskın siyanobakteriler Prochlorococcus marinus (%39.17), Synechococcus sp. (%20.85), Lyngbya sp. (%12.00), Trichodesmium erythraeum (%7.33), Aphanocapsa sp. (%4.33) ve Leptolyngbya sp. (%3.33) olarak belirlenmiştir. Bu çalışma ile müsilaj yapısında zararlı alg patlamalarına neden olabilecek ve toksik etkilere sahip olabilecek siyanobakteri türleri tespit edilmiştir. Endüstriyel faaliyetler, insan kaynaklı etkiler, turizm ve yapay aydınlatma dahil olmak üzere ciddi rahatsızlıklardan etkilenen Marmara Denizi ve Çanakkale Boğazı, hiçbir zaman eski ekolojik durumuna tam olarak geri döndürülemeyecektir. Bu nedenle, devlet ve yerel yönetimler müsilajla mücadeleye daha fazla önem vermelidir.

Kaynakça

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Cyanobacterial Communities in Mucilage Collected from Çanakkale Strait (Dardanelles): Metagenomic Approach

Yıl 2022, , 11 - 18, 20.07.2022
https://doi.org/10.46384/jmsf.1021736

Öz

In this study, cyanobacterial communities in mucilage samples collected from three stations in the Dardanelles Strait were analyzed with a metagenomic approach. Mucilage samples were collected at the beginning of June 2021 from three points of the Dardanelles (Station 1: 40°6'42.78"N, 26°23'57.00"E; Station 2: 40°9'8.09"N, 26°24'16.19"E; Station 3: 40°6 '21.62"N, 26°22'41.25"E). The dominant cyanobacteria were Prochlorococcus marinus (39.17%), Synechococcus sp. (20.85%), Lyngbya sp. (12.00%), Trichodesmium erythraeum (7.33%), Aphanocapsa sp. (4.33%) and Leptolyngbya sp. (3.33%), which constituted 87.00 % of the total number of sequences. In this study, cyanobacteria species that can cause harmful algal blooms and have toxic effects on the mucilage structure have been determined. The Marmara Sea and the Dardanelles Strait, which have been affected by serious disturbances, including industrial activities, anthropogenic impacts, tourism and artificial lighting, will never be fully restored to their former ecological state. In addition, cyanobacteria species in the mucilage may cause harmful algal blooms and have toxic effects that threaten the future well-being of coastal populations and ecosystem stability. Thus, the government and local authorities should pay more attention to combating the mucilage.

Kaynakça

  • Alvarenga, D. O., Fiore, M. F., & Varani, A. M. (2017). A metagenomic approach to cyanobacterial genomics. Frontiers in microbiology, 8, 809.
  • Aktan, Y., & Aykulu, G. (2003). A study on the occurrence of Merismopedia Meyen (Cyanobacteria) populations on the littoral sediments of İzmit Bay (Turkey). Turkish Journal of Botany, 27(4), 277-284.
  • Aktan, Y., & Balkıs, N. (2014). Seasonal variations of epipelic algal community in relation to environmental factors in the Istanbul Strait (the Bosphorus), Turkey. Marine Pollution Bulletin, 81(1), 268-275.
  • Aysel, V., Dural, B., Şenkardeşler, A., Erduǧan, H., & Aysel, F. (2008). Marine algae and seagrasses of Samsun (Black Sea, Turkey). Journal of the Black Sea/Mediterranean Environment, 14(1), 53-56.
  • Aysel, V., Erdugan, H., & Okudan, E. Ş. (2006c). Marine algae and seagrasses of Hatay (Mediterranean, Turkey). Journal of the Black Sea/Mediterranean Environment, 12, 159-179.
  • Aysel, V., Erdugan, H., & Okudan, E. Ş. (2006d) Marine Algae and Seagrasses of Adana (Mediterranean, Turkey) Adana Kıyıları Deniz Algleri ve Deniz Çayırları. J. Black Sea/Mediterranean Environment, 12, 35-57.
  • Aysel, V., Erduğan, H. A., & Dural-Tarakçi, B. (2005d). Marine Flora of Kastamonu (Black Sea, Turkey). Journal of Black Sea/Mediterranean Environment, 11, 179-194.
  • Aysel, V., Erduğan, H., Dural, B., & Okudan, E. Ş. (2006a). Marine algae and seagrasses of Tekirdağ (Black Sea, Turkey) J. Black Sea/Mediterranean Environment, 12, 251-267.
  • Aysel, V., Erduğan, H., Dural-Tarakçı, B., Okudan, E. Ş., Şenkardeşler, A., & Aysel, F. (2004). Marine flora of Sinop (Black Sea, Turkey). EU journal of fisheries & aquatic sciences, 21(1-2), 59-68.
  • Aysel, V., Erduğan, H., Okudan, E. Ş., & Hakan, E. R. K. (2005c). Bozcaada (Çanakkale, Ege Denizi, Türkiye) deniz algleri ve deniz çayırları. Su Ürünleri Dergisi, 22(1), 59-68.
  • Aysel, V., Erduğan, H., Tarakçı, B., & Okudan, E. Ş. (2005a). Marine algae and seagrasses of Giresun shores (Black Sea, Turkey). Journal of the Black Sea/Mediterranean Environment, 11(3), 271-285.
  • Aysel, V., Okudan, E. Ş., & Erduğan, H. (2006b). Marine algae and seagrasses of Mersin shore (Mediterranean, Turkey). Journal of the Black Sea/Mediterranean Environment, 12(1), 79-97.
  • Backer, L. C., Manassaram-Baptiste, D., LePrell, R., & Bolton, B. (2015). Cyanobacteria and algae blooms: review of health and environmental data from the harmful algal bloom-related illness surveillance system (HABISS) 2007–2011. Toxins, 7(4), 1048-1064. doi:org/10.3390/toxins7041048
  • Balci, M., & Balkis, N. (2017). Assessment of phytoplankton and environmental variables for water quality and trophic state classification in the Gemlik Gulf, Marmara Sea (Turkey). Marine Pollution Bulletin, 115(1-2), 172-189. doi:org/10.1016/j.marpolbul.2016.12.007
  • Balkıs-Ozdelıce, N., Durmuş, T., & Balcı, M. A 2021. A preliminary study on the ıntense pelagic and benthic mucilage phenomenon observed in the sea of Marmara. International Journal of Environment and Geoinformatics, 8(4), 414-422. doi:org/10.30897/ijegeo.954787
  • Balkis, N., & Taş, S. (2016). Phytoplankton of the Sea of Marmara: A review. In: Yücel, M., Özkan, K., & Tezcan, D. (Eds.,). The sea of Marmara marine biodiversity fisheries conservation and governance. 1st ed., 326-343p, Turkish marine research foundation (TUDAV) Publication, Turkey.
  • Bayindirli, C., & Ulysal, Z. (2007). Monthly changes in the abundance and biomass of cyanobacteria Synechococcus in the Cilician Basin. Rapp. Comm. Int. Mer. Médit, 38, 347.
  • Cruz, B. N., & Neuer, S. (2019). Heterotrophic bacteria enhance the aggregation of the marine picocyanobacteria Prochlorococcus and Synechococcus. Frontiers in Microbiology, 10, 1864. doi:org/10.3389/fmicb.2019.01864
  • Çinar, M. E., Bilecenoglu, M., Ozturk, Β., Katagan, Τ., Yokes, Μ., Aysel, V., Dağlı, E., Açık, S., Özcan, T., & Erdogan, H. (2011). An updated review of alien species on the coasts of Turkey. Mediterranean Marine Science, 12(2), 257-315. doi:org/10.12681/mms.34
  • De J Magalhães, A. A., da Luz, L. D., & de Aguiar Junior, T. R. (2019). Environmental factors driving the dominance of the harmful bloom‐forming cyanobacteria Microcystis and Aphanocapsa in a tropical water supply reservoir. Water Environment Research, 91(11), 1466-1478. doi.org/10.1002/wer.1141.
  • De Philippis, R., Faraloni, C., Sili, C., & Vincenzini, M. (2005). Populations of exopolysaccharide-producing cyanobacteria and diatoms in the mucilaginous benthic aggregates of the Tyrrhenian Sea (Tuscan Archipelago). Science of the total environment, 353(1-3), 360-368. doi:org/10.1016/j.scitotenv.2005.09.078
  • Develi, E. E., & Kıdeyş, A. E. (2000). Weekly variations in phytoplankton structure of a harbour in Mersin Bay (north-eastern Mediterranean). Turkish Journal of Botany, 24(1), 13-24.
  • Eker-Develi, E., Kideys, A. E., & Tugrul, S. (2006). Role of Saharan dust on phytoplankton dynamics in the northeastern Mediterranean. Marine Ecology Progress Series, 314, 61-75. doi:10.3354/meps314061
  • Feyzioglu, A. M., Kurt, I., Boran, M., & Sivri, N. (2004). Abundance and distribution of cyanobacteria Synechococcus spp in the South-eastern Black Sea during 2001 summer. Indian Journal of Marine Sicences, 33, 365-368.
  • Feyzioğlu, A. M., Eruz, C., & Yıldız, İ. (2015). Geographic variation of Picocyanobacteria Synechococcus spp. along the anatolian coast of the black sea during the Late Autumn of 2013. Turkish Journal of Fisheries and Aquatic Sciences, 15(3), 465-469. doi: 10.4194/1303-2712-v15_2_33
  • Güreşen, A., Güreşen, S. O., & Aktan, Y. (2020). Temporal and Bathymetric Variation of Epiphytic Microalgae on Posidonia oceanica (L.) Delile Leaves in Gökçeada (North Aegean, Turkey). Turkish Journal of Fisheries and Aquatic Sciences, 20(10), 727-737. doi:org/10.4194/1303-2712-v20_10_02
  • Güreşen, A., Okudan, E. Ş., Dural, B., & Aysel, V. (2015). An updated checklist of marine flora on the continental shelf of Gökçeada island (northern Aegean Sea, Turkey). Journal of Aquaculture Engineering and Fisheries Research, 3(4), 171-87.
  • ISO 5667-9. (1992). International Standards Organization (ISO), Water quality Sampling Part 9: Guidance on sampling from marine waters, Geneva, Switzerland.
  • Iuculano, F., Mazuecos, I. P., Reche, I., & Agustí, S. (2017). Prochlorococcus as a possible source for transparent exopolymer particles (TEP). Frontiers in Microbiology, 8, 709. doi:org/10.3389/fmicb.2017.00709
  • Kalaitzidou, M., Filliousis, G., Petridou, E., Economou, V., Theodoridis, A., & Aggelidis, P. (2015). Isolation of toxic marine cyanobacteria and detection of microcystins in Thermaikos Gulf in Central Macedonia in Greece. HAICTA: 832-841.
  • Karaçuha, A., & Gönülol, A. (2007). Sinop-Ayancık Kıyıları Üst-İnfralittoralinin alg florası. Journal of FisheriesSciences. com, 1(1), 1-12. doi:10.3153/jfs.com00101.2007001
  • Kısa, D., & Pabuçcu, K. (2016). Contributions to algae flora of Gerze coastline (Sinop, Turkey). Sinop University Journal of Natural Sciences, 1, 36-45.
  • Kocum, E. (2020). Autotrophic nanoplankton dynamics is significant on the spatio-temporal variation of phytoplankton biomass size structure along a coastal trophic gradient. Regional Studies in Marine Science, 33, 100920. doi:org/10.1016/j.rsma.2019.100920
  • Kopuz, U., Feyzioğlu, AM., & Ağırbaş, E. (2012). Güney Doğu Karadeniz'de 2010 yılı baharının son periyodu boyunca Pikoplankton dinamikleri. Turkish Journal of Fisheries and Aquatic Sciences, 12, 397-405. doi: 10.4194/1303-2712-v12_2_28
  • Kurt, O., Ulcay, S., Taşkın, E., & Öztürk, M. (2010). Taxonomy and Description of the Three Marine Cyanophycean Algae from the Mediterranean Sea. Turkish Journal of Fisheries and Aquatic Sciences, 10(1). doi: org/10.4194/trjfas.2010.0105
  • Lundgreen, R. B., Jaspers, C., Traving, S. J., Ayala, D. J., Lombard, F., Grossart, H. P., Nielsen, G. T., Munk, P., & Riemann, L. (2019). Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea. Scientific Reports, 9(1), 1-12. doi:org/10.1038/s41598-019-45146-7
  • Metaxatos, A., Panagiotopoulos, C., & Ignatiades, L. (2003). Monosaccharide and aminoacid composition of mucilage material produced from a mixture of four phytoplanktonic taxa. Journal of Experimental Marine Biology and Ecology, 294(2), 203-217. doi:org/10.1016/S0022-0981(03)00269-7
  • Nübel, U., Garcia-Pichel, F., and Muyzer, G.: PCR primers to amplify 16S rRNA genes from cyanobacteria, Appl. Environ. Microb., 63, 3327–32, 1997. doi:org/10.1128/aem.63.8.3327-3332.1997
  • Okudan, E. Ş., & Aysel, V. (2005). Marine algae and seagrasses of Antalya coastline (Mediterranean, Turkey). Journal of the Black Sea/Mediterranean Environment, 11(3), 303-325.
  • Parlakay, A., Sukatar, A., & Şenkardeşler, A. (2005). Marine Flora Between South Çeşme and Cape Teke (Izmir, Aegean Sea, Turkey). Ege Journal of Fisheries and Aquatic Sciences, 22(1), 187-194.
  • Polat, S., & Uysal, Z. (2009). Abundance and biomass of picoplanktonic Synechococcus (Cyanobacteria) in a coastal ecosystem of the Northeastern Mediterranean, the Bay of İskenderun. Marine Biology Research, 5(4), 363-373. doi:org/10.1080/17451000802512275
  • Polat, S., Sarıhan, E., & Koray, T. (2000). Seasonal changes in the phytoplankton of the Northeastern Mediterranean (Bay of Iskenderun). Turkish Journal of Botany, 24(1), 1-12.
  • Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., Peplies, J., & Glockner, F.O. (2013) The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools. Nucleic Acids Res. 41, 590–596. doi:org/10.1093/nar/gks1219
  • Shiganova, T. (2008). Introduced Species. In The Black Sea Environment; Kostianoy, A.G., Kosarev, A.N., Eds.; Springer: Berlin/Heidelberg, Germany, pp. 375–406.
  • Spatharis, S., Skliris, N., Meziti, A., & Kormas, K. A. (2012). First record of a Trichodesmium erythraeum bloom in the Mediterranean Sea. Canadian Journal of Fisheries and Aquatic Sciences, 69(8), 1444-1455. doi:org/10.1139/f2012-020
  • Stewart, I., Webb, P. M., Schluter, P. J., & Shaw, G. R. (2006). Recreational and occupational field exposure to freshwater cyanobacteria–a review of anecdotal and case reports, epidemiological studies and the challenges for epidemiologic assessment. Environmental Health, 5(1), 1-13.
  • Taş, S., Okuş, E., & Aslan-Yılmaz, A. (2006). The blooms of a cyanobacterium, Microcystis cf. aeruginosa in a severely polluted estuary, the Golden Horn, Turkey. Estuarine, Coastal and Shelf Science, 68(3-4), 593-599. doi:org/10.1016/j.ecss.2006.02.025
  • Taşkın, E., Öztürk, M., Kurt, O., & Aysel, V. (2001). Three new records for the marine algal flora of Turkey. Turkish Journal of Botany, 25(4), 245-248.
  • Teneva, I., Stoyanov, P., Dzhambazov, B., Mladenov, R., & Belkinova, D. (2015). What is known about Cyanoprokaryota and the algal blooms along the Bulgarian Black Sea coast: an overview. Journal of BioScience & Biotechnology, 4(3).
  • Toklu-Alicli, B., Polat, S., & Balkis-Ozdelice, N. (2020). Temporal variations in the abundance of picoplanktonic Synechococcus (Cyanobacteria) during a mucilage event in the Gulfs of Bandırma and Erdek. Estuarine, Coastal and Shelf Science, 233, 106513. doi:org/10.1016/j.ecss.2019.106513
  • Ulcay, S., Taşkın, E., Kurt, O., & Öztürk, M. (2015). Marine benthic Cyanobacteria in Northern Cyprus (Eastern Mediterranean Sea). Turkish Journal of Botany, 39(1), 173-188. doi:10.3906/bot-1311-52
  • Uysal, Z. (2001). Chroococcoid cyanobacteria Synechococcus spp. in the Black Sea: pigments, size, distribution, growth and diurnal variability. Journal of Plankton Research, 23(2), 175-190. doi:org/10.1093/plankt/23.2.175
  • Uysal, Z. (2006). Vertical distribution of marine cyanobacteria Synechococcus spp. in the Black, Marmara, Aegean, and eastern Mediterranean seas. Deep Sea Research Part II: Topical Studies in Oceanography, 53(17-19), 1976-1987. doi:org/10.1016/j.dsr2.2006.03.016
  • Uysal, Z. (2016). Bacterioplankton, Cyanobacteria, Phytoplankton. pp. 79-93. In: The Turkish Part of the Mediterranean Sea; Marine Biodiversity, Fisheries, Conservation and Governance. Turan, C., Salihoğlu, B., Özgür
  • Özbek, E., Öztürk, B. (Eds.) Turkish Marine Research Foundation (TUDAV), Publication No: 43, Istanbul, TURKEY. Uysal, Z. 2000. Pigments, size and distribution of Synechococcus spp. in the Black Sea. Journal of Marine Systems, 24(3-4),313-326. doi:org/10.1016/S0924-7963(99)00092-5
  • Uysal, Z., & Köksalan, İ. (2006). The annual cycle of Synechococcus (cyanobacteria) in the northern Levantine Basin shelf waters (Eastern Mediterranean). Marine Ecology, 27(3), 187-197. doi:org/10.1111/j.1439-0485.2006.00105.x
  • Vinogradova, O. N., & Bryantseva, Y. V. (2017). Taxonomic revision of the species composition of Cyanobacteria/Cyanoprokaryota of the Ukrainian coast of the Black Sea. International Journal on Algae, 19(4). doi:10.1615/InterJAlgae.v19.i4.10
  • Yildirim, Z. D., & Sukatar, A. (2009). Investigation of marine flora in Ilıca Bay (Çeşme, Izmir, Aegean Sea/Turkey). Biological Diversity and Conservation, 2, 82-91.
  • Yilmaz, S., Küçüker, M., & Kahraman Yilmaz, D., (2021). Metagenomic characterization of planktonic communities during a mucilage event in the Çanakkale Strait (Dardanelles), Turkey. Journal of Anatolian Environmental and Animal Sciences. 6(3), 421-427. doi:org/10.35229/jaes.966509
  • Yücel, N. Kılıç, E. and Uysal, Z. (2018). Abundance and Distribution of Picoplankton in the northeastern Mediterranean Sea. pp. 303-309. In: Proceeding Book, International Marine & Freshwater Sciences Symposium, Özcan G, Tarkan A.S, Özcan T (Eds.), 18-21 October 2018, Kemer-Antalya / Turkey.
  • Yücel, N., Uysal, Z., & Tuğrul, S. (2017). Variability in phytoplankton pigment composition in Mersin Bay. Aquatic Sciences and Engineering, 32(1), 49-70. doi:org/10.18864/TJAS201705
  • Zaitsev YUP, Nesterova DA (2003) Conference on the evolution of marine ecosystem under impact of invaders and artificial mortality of fauna (in Russian). Rostov-on-Don, Russia, p 85.
Toplam 62 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Ekoloji
Bölüm Araştırma Makaleleri
Yazarlar

Sevdan Yılmaz 0000-0002-4809-5809

Ekrem Şanver Çelik 0000-0003-4514-457X

Dilek Kahraman Yılmaz 0000-0002-9626-5446

Mehmet Ali Küçüker 0000-0001-9648-8925

Yayımlanma Tarihi 20 Temmuz 2022
Gönderilme Tarihi 11 Kasım 2021
Yayımlandığı Sayı Yıl 2022

Kaynak Göster

APA Yılmaz, S., Çelik, E. Ş., Kahraman Yılmaz, D., Küçüker, M. A. (2022). Cyanobacterial Communities in Mucilage Collected from Çanakkale Strait (Dardanelles): Metagenomic Approach. Çanakkale Onsekiz Mart University Journal of Marine Sciences and Fisheries, 5(1), 11-18. https://doi.org/10.46384/jmsf.1021736