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Detection of bacterial stem rot disease in maize plants grown in Adana and Osmaniye povinces and investigation of biological control possibilities

Yıl 2023, , 667 - 682, 18.12.2023
https://doi.org/10.37908/mkutbd.1331813

Öz

Dickeya zeae, the causal agent of bacterial stem rot disease in maize plant, causes disease symptoms such as yellowing and browning of the leaves, softening of the stem, necrosis and bad odour. In this study, the prevalence and biological control possibilities of maize Bacterial Stem Rot disease in Adana and Osmaniye provinces were investigated. The prevalence rates of the disease were determined as 8%, 9% and 40% in Ceyhan, Kozan and Kadirli districts. The incidence rate of the disease was found to be between 8-15%. Bacterial isolates from infected plants were identified as Dickeya sp. using traditional methods, MALDI TOF MS and PCR tests. While the presence of the pathogen could not be detected in soil, it was found in irrigation water. The risk of transmission of the pathogen to healthy fields through irrigation water was revealed in this study. In the biological control of the disease, 332 candidate antagonist bacterial isolates were used and 84 antagonist bacterial isolates were found to have antibacterial activity against Dickeya sp. In semi-in vivo trials on potato slices, six of the 84 isolates caused less decay than the positive control. Two antagonist isolates (X77 and OG/1-12) suppressed decay by 56% and 27%, respectively. These antagonists were identified as species belonging to the genus Bacillus by MALDI TOF MS analysis. The identification of an effective representative antagonist for controlling of Dickeya sp., which has no chemical control, is a promising result in terms of biological control.

Kaynakça

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  • Aysan, Y., Karatas, A., & Cinar, O. (2003). Biological control of bacterial stem rot caused by Erwinia chrysanthemi on tomato. Crop Protection, 22 (6), 807-811. https://doi.org/10.1016/S0261-2194(03)00030-9
  • Bertani, I., Passos da Silva, D., Abbruscato, P., Piffanelli, P., & Venturi, V. (2013). Draft genome sequence of the plant pathogen Dickeya zeae DZ2Q, isolated from rice in Italy. Genome Announcements, 1 (6), https://doi.org/10.1128/genomea.00905-13
  • Bitgen, E., & Mirik, M. (2021). Tekirdağ ilinde yetişen zeytin ağaçlarında dal kanseri hastalığı etmeni Pseudomonas savastanoi pv. savastanoi’nin tanısı ve antagonist bakteriyel izolatlar ile biyolojik mücadelesi. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 26 (2), 326-336. https://doi.org/10.37908/mkutbd.881977
  • Bora, T., & Karaca, I. (1970). Kültür Bitkilerinde Hastalığın ve Zararın Ölçülmesi. Ege Üniversitesi Ziraat Fak. Yardımcı Ders Kitabı, No:167, Ege Üniversitesi Matbaası, Bornova, 43 s.
  • Bozkurt, İ.A., & Soylu S. (2019). Elma kök uru hastalığı etmeni Rhizobium radiobacter’e karşı epifit ve endofit bakteri izolatlarının antagonistik potansiyellerinin belirlenmesi. Tekirdağ Ziraat Fakültesi Dergisi, 16, 348-361. https://doi.org/10.33462/jotaf.556256
  • Caplik, D., Kusek, M., Kara, S., Seyrek, A., & Celik, Y. (2022). First report of bacterial stalk rot of maize caused by Dickeya zeae in Turkey. New Disease Reports, 45 (1), e12070. https://doi.org/10.1002/ndr2.12070
  • Cappaert, M.R., Powelson, M.L., Franc, G.D., & Harrison, M.D. (1988). Irrigation water as a source of inoculum of soft rot Erwinias for aerial stem rot of potatoes. Phytopathology, 78 (12), 1668-1672. https://doi.org/10.1094/Phyto-78-1668
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Adana ve Osmaniye illerinde yetiştirilen mısır bitkilerinde bakteriyel gövde çürüklüğü hastalığının saptanması ve biyolojik mücadele olanaklarının araştırılması

Yıl 2023, , 667 - 682, 18.12.2023
https://doi.org/10.37908/mkutbd.1331813

Öz

Mısır bitkisinde bakteriyel gövde çürüklüğü hastalığı etmeni Dickeya zeae yapraklarda sararma, kahverengileşme, gövdede yumuşama, nekroz ve kötü koku gibi hastalık belirtilerine neden olmaktadır. Bu çalışmada mısır Bakteriyel Gövde Çürüklüğü hastalığının Adana ve Osmaniye illerinde yaygınlığı ve biyolojik mücadele olanakları araştırılmıştır. Ceyhan, Kozan ve Kadirli ilçelerinde yapılan surveylerde hastalığın yaygınlık oranı %8, %9 ve %40 olarak tespit edilmiştir. Hastalığın görüldüğü tarlalarda, hastalığın bulunuş oranının %8-15 aralığında olduğu saptanmıştır. Hasta bitkilerden izole edilen bakteri izolatları geleneksel yöntemler, MALDI TOF MS ve PCR testleri kullanılarak Dickeya sp. olarak tanılanmıştır. Patojenin varlığı toprakta tespit edilemezken, sulama suyunda bulunduğu saptanmıştır. Patojenin sulama suyuyla sağlıklı tarlalara bulaşma riskinin olduğu bu çalışmayla ortaya konmuştur. Hastalığın biyolojik mücadelesinde 332 adet aday antagonist bakteri izolatı kullanılmış, 84 adet antagonist bakteri izolatının Dickeya sp.’ye karşı antibakteriyel etkiye sahip olduğu belirlenmiştir. Patates dilimlerinde yapılan yarı in vivo denemelerde 84 izolatın altısı pozitif kontrolden daha az çürüme oluşturmuştur. İki antagonist izolat (X77 ve OG/1-12 kodlu) çürümeyi sırasıyla %56 ve %27 oranında baskılamıştır. Bu antagonistlerin MALDI TOF MS analizi ile Bacillus cinsine ait türler olduğu belirlenmiştir. Kimyasal mücadelesi olmayan hastalık ile mücadelede etkili bölgesel antagonistin saptanması biyolojik mücadele açısından ümitvar bir sonuçtur.

Etik Beyan

Bu makalede insan veya hayvan deneklerle herhangi bir çalışma bulunmaması nedeniyle etik onaya gerek duyulmamaktadır.

Kaynakça

  • Aktepe, B.P. (2021). The effect of different plant activators and biological preparete on the biological control of bacterial speck disease in tomato. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 26 (2), 355-364. https://doi.org/10.37908/mkutbd.908921
  • Anonim (2022). Türkiye İstatistik Kurumu. https://www.tuik.gov.tr (Erişim tarihi 10.06.2023).
  • Anonymous (2022). Food and Agriculture Organization of the united nations. https://www.fao.org (Erişim tarihi 10.06.2023).
  • Aysan, Y., Karatas, A., & Cinar, O. (2003). Biological control of bacterial stem rot caused by Erwinia chrysanthemi on tomato. Crop Protection, 22 (6), 807-811. https://doi.org/10.1016/S0261-2194(03)00030-9
  • Bertani, I., Passos da Silva, D., Abbruscato, P., Piffanelli, P., & Venturi, V. (2013). Draft genome sequence of the plant pathogen Dickeya zeae DZ2Q, isolated from rice in Italy. Genome Announcements, 1 (6), https://doi.org/10.1128/genomea.00905-13
  • Bitgen, E., & Mirik, M. (2021). Tekirdağ ilinde yetişen zeytin ağaçlarında dal kanseri hastalığı etmeni Pseudomonas savastanoi pv. savastanoi’nin tanısı ve antagonist bakteriyel izolatlar ile biyolojik mücadelesi. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 26 (2), 326-336. https://doi.org/10.37908/mkutbd.881977
  • Bora, T., & Karaca, I. (1970). Kültür Bitkilerinde Hastalığın ve Zararın Ölçülmesi. Ege Üniversitesi Ziraat Fak. Yardımcı Ders Kitabı, No:167, Ege Üniversitesi Matbaası, Bornova, 43 s.
  • Bozkurt, İ.A., & Soylu S. (2019). Elma kök uru hastalığı etmeni Rhizobium radiobacter’e karşı epifit ve endofit bakteri izolatlarının antagonistik potansiyellerinin belirlenmesi. Tekirdağ Ziraat Fakültesi Dergisi, 16, 348-361. https://doi.org/10.33462/jotaf.556256
  • Caplik, D., Kusek, M., Kara, S., Seyrek, A., & Celik, Y. (2022). First report of bacterial stalk rot of maize caused by Dickeya zeae in Turkey. New Disease Reports, 45 (1), e12070. https://doi.org/10.1002/ndr2.12070
  • Cappaert, M.R., Powelson, M.L., Franc, G.D., & Harrison, M.D. (1988). Irrigation water as a source of inoculum of soft rot Erwinias for aerial stem rot of potatoes. Phytopathology, 78 (12), 1668-1672. https://doi.org/10.1094/Phyto-78-1668
  • Çetinkaya-Yıldız, R., & Aysan, Y. (2022). Doğu Akdeniz bölgesinde yetişen mısır (Zea mays) bitkisinin yeni bir bakteriyel hastalığı: Dickeya zeae’nın neden olduğu bakteriyel sap çürüklüğü. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 27 (3), 493-501. https://doi.org/10.37908/mkutbd.1119953
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  • Jatoth, R., Singh, D., Geat, N., Babu, P.L., & Kumar A. (2022). Distribution of bacterial stalk rot disease of maize in India and identification of causal agent using biochemical and fliC gene based marker and its sensitivity against chemicals and bacterial antagonist. Indian Phytopathology, 75, 517-525. https://doi.org/10.1007/s42360-021-00455-8
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  • Karnez, E., Güldoğan Ö., Ercan N., Korkmaz K., & Aysan Y. (2021) Domateste bakteriyel benek hastalığının mücadelesinde vermikompost uygulamasının etkisi. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 26 (3), 726-735. https://doi.org/10.37908/mkutbd.986521
  • Kırtok., Y. (1998). Mısır Üretimi ve Kullanımı. Kocaoluk Basım ve Yayınevi. Sf. 446.
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  • Kumar, A., Singh, M., Kaur, H., Rawal, R., & Singh, P. (2017). A review on bacterial stalk rot disease of maize caused by Dickeya zeae. Journal of Applied and Natural Science, 9 (2), 1214-1225.
  • Lelliott, R.A., & Stead, D.E. (1987). Methods for the diagnosis of bacterial diseases of plants. TF Preece (Edt) Methods in Plant Pathology Blackwell Scientific Publications, Oxford, UK, 219 pp.
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  • Lin, B.R., Shen, H.F., Pu, X.M, Tian, X.S., Zhao, W.J., Zhu, S.F., & Dong, M.M. (2010) First report of a soft rot of banana in Mainland China caused by a Dickeya sp. (Pectobacterium chrysanthemi). Plant Diseases, 94 (5), 640. https://doi.org/10.1094/PDIS-94-5-0640C
  • Lopes, C.A., Stall R.E., & Bartz J.A. (1986). Bacterial stalk and top rot of maize in florida caused by Erwinia chrysanthemi pv. zeae. Plant Diseses, 70, 259. https://doi.org/10.1094/PD-70-259a
  • Luo, L., Zhao, C., Wang, E., Raza, A., & Yin, C. (2022). Bacillus amyloliquefaciens as an excellent agent for biofertilizer and biocontrol in agriculture: An overview for its mechanisms. Microbiological Research, 259, 127016. https://doi.org/10.1016/j.micres.2022.127016
  • Martinez-Cisneros, B.A., Juarez-Lopez, G., Valencia-Torres, N., Duran-Peralta, E., & Mezzalama, M. (2014). First report of bacterial stalk rot of maize caused by Dickeya zeae in Mexico. Plant Disease, 98 (9), Article 9. https://doi.org/10.1094/PDIS-02-14-0198-PDN
  • Mitchell, R.E. (1992). Metabolites from pseudomonads that inhibit the growth of Erwinia amylovora. Acta Horticulture, 338, 219-222. https://doi.org/10.17660/ActaHortic.1993.338.31
  • Myung, I., Jeong, I.H., Moon, S.Y., Kim, W.G., Lee, S.W., Lee, Y.H., Lee, Y., Shim, H.S., & Ra, D.S. (2010). First report of bacterial stalk rot of sweet corn caused by Dickeya zeae in Korea. New Disease Reports, 22, 15. https://doi.org/10.5197/j.2044-0588.2010.022.015
  • Nassar, A., Darrase, A., Lemattre, M., Kotoujansky, A., Dervin, C., Veldel, R., & Bertheau, Y. (1996). Characterization of Erwinia chrysanthemi by pectinolytic isozyme polymorphism and restriction fragment length polymorphism analysis of PCR-amplified fragments of pel genes. Applied and Environmental Microbiology, 62, 2228-2235. https://doi.org/10.1128/aem.62.7.2228-2235.1996
  • Nishat, A., & Mall, T.P. (2009). Prevalence of maize diseases in Bahraich (U.P.). Annals of Plant Protection Sciences, 17 (2) 512-513.
  • Oerke, E.C. (2006). Crop losses to pests. Journal Agricultural Sciences, 144, 31-43. https://doi.org/10.1017/S0021859605005708
  • Öztürk, M., & Soylu, S. (2022a). Yozgat ve Kırşehir illerinde tüketime sunulmuş patates yumrularında bakteriyel yumuşak çürüklük hastalığı etmeni Pectobacterium izolatlarının izolasyonu ve tanılanması. Tekirdağ Ziraat Fakültesi Dergisi, 19, 332-342. https://doi.org/10.33462/jotaf.974350
  • Öztürk, M., & Soylu, S. (2022b). Yozgat ili beyaz baş lahana üretim alanlarında bakteriyel yumuşak çürüklük hastalığına neden olan Pectobacterium izolatlarının tanılanması. KSU Tarım ve Doğa Dergisi, 25, 495-503. https://doi.org/10.18016/ksutarimdoga.vi.943765
  • Perombelon M.C.M., & van der Wolf, J.M. (2002). Methods for the detection and quantification of Erwinia carotovora subsp. atroseptica (Pectobacterium carotovorum subsp. atrosepticum) on potatoes: A laboratory manual. Scottish Crop Research Institute Annual Report, 10.
  • Perombelon, M.C.M., & Kelman, A. (1980). Ecology of the soft rot Erwinias. Annual Review of Phytopathology, 18, 361-387.
  • Prokić, A., Zlatković, N., Kuzmanović, N., Ivanović, M., Gašić, K., Pavlović, Ž., & Obradović, A. (2020). Identification and characterization of Dickeya zeae strains associated with maize stalk soft-rot in northern Serbia. European Journal of Plant Pathology, 157 (3), 685-691. https://doi.org/10.1007/s10658-020-02019-4
  • Pu, X. M., Zhou, J.N., Lin, B.R., & Shen, H.F. (2012). First report of bacterial foot rot of rice caused by a Dickeya zeae in China. Plant Disease, 96 (12) 1818. https://doi.org/10.1094/PDIS-03-12-0315-PDN
  • Quinn, C. E., Sells, I. A., Graham, & D. C. (1980). Soft rot Erwinia bacteria in the atmospheric bacterial aerosol. Journal of Applied Microbiology, 49 (1), 175-181. https://doi.org/10.1111/j.1365-2672.1980.tb01055.x
  • Ramachandran, K., Manaf, U.A., & Zakaria, L. (2015). Molecular characterization and pathogenicity of Erwinia spp. associated with pineapple Ananas comosus (L.) Merr.] and papaya (Carica papaya L.). Journal of Plant Protection Research, 55 (4), 396-404. https://doi.org/10.1515/jppr-2015-0053
  • Reifschneider, F.J.B., & Lopes, C.A. (1982). Bacterial top and stalk rot of maize in Brazil. Plant Disease, 519-520. https://doi.org/10.1094/PD-66-519
  • Sah, D.N. (1991). Influence of environmental factors on infection of maize (Zea mays L.) by Erwinia chrysanthemi pv.zeae. Journal of the Institute of Agriculture and Animal Science, 12, 41-45.
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  • Samson, R., Legendre, J.B., Christen, R., Fischer-Le Saux, M., Achouak, W., & Gardan, L. (2005). Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiacato the genus Dickeya gen. nov. As Dickeya chrysanthemi comb. nov. And Dickeya paradisiaca comb. nov. and delineation of four novel species, Dickeya dadantii sp. nov., Dickeya dianthicola sp. nov., Dickeya dieffenbachiae sp. nov. and Dickeya zeae sp. nov. International Journal of Systematic and Evolutionary Microbiology, 55 (4), 1415-1427. https://doi.org/10.1099/ijs.0.02791-0
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  • Soylu, E.M., Soylu, S., Kara, M., & Kurt, Ş. (2020). Sebzelerde sorun olan önemli bitki fungal hastalık etmenlerine karşı vermikomposttan izole edilen mikrobiyomların in vitro antagonistik etkilerinin belirlenmesi. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 23 (1), 7-18. https://doi.org/10.18016/ksutarimdoga.vi.601936
  • Suriani, B.P., Junaid, M., & Muis, A. (2021). The presence of bacterial stalk rot disease on corn in Indonesia: A review. IOP Conference Series. Earth and Environmental Science, 911-012058. https://doi.org/10.1088/1755-1315/911/1/012058
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  • Toth, I.K., van Der Wolf, J.M., Saddler, G., Lojkowska, E., Hélias, V., Pirhonen, M., Tsror (Lahkim), L., & Elphinstone, J.G. (2011). Dickeya species: An emerging problem for potato production in Europe. Plant Pathology, 60 (3), 385–399. https://doi.org/10.1111/j.1365-3059.2011.02427.x
  • Uysal, A., Kurt, Ş., Soylu, S., Soylu, E.M., & Kara, M. (2019). Yaprağı yenen sebzelerdeki mikroorganizma türlerinin MALDI-TOF MS (Matris Destekli Lazer Desorpsiyon/İyonizasyon Uçuş Süresi Kütle Spektrometresi) tekniği kullanılarak tanılanması. Yüzüncü Yıl Üniversitesi Tarım Bilimleri Dergisi, 29, 595-603. https://doi.org/10.29133/yyutbd.627850
  • Yanchang, Y., Ziting, Y., Muqing, Z., Chengwu, Z., & Baoshan, C. (2021). First report of stalk bacterial soft rot of sugarcane caused by Dickeya zeae in China. Plant Disease, 105 (4) 1188-1188. https://doi.org/10.1094/PDIS-10-20-2234-PDN
  • Zhang, J.X., Shen, H.F., Pu, X.M., Lin, B.R., & Hu, J. (2014). Identification of Dickeya zeae as a casual agent of bacterial soft rot in banana in China. Plant Disease, 98 (4), 436-442. https://doi.org/10.1094/PDIS-07-13-0711-RE
  • Zhou, J.N., Liu, S.Y., Chen, Y.F., & Liao, L.S. (2015). First report of Pantoea anthophila causing soft rot disease in Clausena lansium (Wampee) in China. Plant Disease, 99 (3), 416. https://doi.org/10.1094/PDIS-10-14-1025-PDN
Toplam 62 adet kaynakça vardır.

Ayrıntılar

Birincil Dil Türkçe
Konular Bitki Koruma (Diğer)
Bölüm Araştırma Makalesi
Yazarlar

Mizgin Keser 0009-0008-3508-2903

Raziye Cetınkaya Yıldız 0000-0002-1967-8829

Yesim Aysan 0000-0003-2647-5111

Erken Görünüm Tarihi 1 Aralık 2023
Yayımlanma Tarihi 18 Aralık 2023
Gönderilme Tarihi 24 Temmuz 2023
Kabul Tarihi 13 Eylül 2023
Yayımlandığı Sayı Yıl 2023

Kaynak Göster

APA Keser, M., Cetınkaya Yıldız, R., & Aysan, Y. (2023). Adana ve Osmaniye illerinde yetiştirilen mısır bitkilerinde bakteriyel gövde çürüklüğü hastalığının saptanması ve biyolojik mücadele olanaklarının araştırılması. Mustafa Kemal Üniversitesi Tarım Bilimleri Dergisi, 28(3), 667-682. https://doi.org/10.37908/mkutbd.1331813

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