The Detailed Karyotype Analysis, Karyotype Asymmetry and Polyploidy in Hemp (Cannabis sativa L.)
Yıl 2024,
Cilt: 13 Sayı: 4, 29 - 32, 30.12.2024
Halil Erhan Eroğlu
,
Nisa Gümüş
,
Güngör Yılmaz
,
Levent Yazici
Öz
Hemp (Cannabis sativa L.) is an economical plant with a diploid chromosome number of 2n = 20 and used in many areas, especially in industry. The aim of this study is to perform detailed karyotype analysis and detailed chromosomal measurements using five different genotypes of the plant known as diploid chromosome number 2n = 20, to determine the karyotype asymmetry for the first time, and to investigate the polyploidy variations. The diploid chromosome number and karyotype formula were 2n = 2x = 20 = 18m + 2sm. The karyotype had small metacentric and submetacentric chromosomes. The smallest chromosome length, largest chromosome length, total haploid chromosome length, and average haploid chromosome length were 2.41, 3.55, 29.87, and 2.99 μm, respectively. Intrachromosomal and interchromosomal karyotype asymmetries were calculated using many different parameters, mainly MCA (mean centromeric asymmetry) and CVCL (variation coefficient of chromosome length). According to the asymmetry values, the species had quite symmetrical karyotype. Although the diploid chromosome number was known as 2n = 20, detailed karyotype analysis and karyotype asymmetry data were presented for the first time by this study. In addition, in the study carried out on five different genotypes, polyploidy variation was detected in one genotype.
Destekleyen Kurum
Yozgat Bozok University, Scientific Research Projects Fund
Proje Numarası
6602a-FEN/20-422
Teşekkür
This work was supported by Yozgat Bozok University, Scientific Research Projects Fund with project number 6602a-FEN/20-422.
Kaynakça
- İncekara F. Endüstri bitkileri ve ıslahı. İzmir: Ege Üniversitesi, Ziraat Fakültesi Yayınları; 1971.
- Atakişi İK. Lif bitkileri yetiştirme ve ıslahı. Tekirdağ: Trakya Üniversitesi, Ziraat Fakültesi Yayınları; 1999.
- Hurgobin B, Tamiru-Oli M, Welling MT, Doblin MS, Bacic A, Whelan J, et al. Recent advances in Cannabis sativa genomics research. New Phytol. 2021;230(1):73-89.
- Stebbins GL. Chromosomal evolution in higher plants. London: Edward Arnold Publisher Ltd; 1971.
- Eroğlu HE, Şimşek N, Koç M, Hamzaoğlu E. Karyotype analysis of some Minuartia L. (Caryophyllaceae) taxa. Plant Syst Evol. 2013;299:67-73.
- Martin E, Kahraman A, Dirmenci T, Bozkurt H, Eroğlu HE. Karyotype evolution and new chromosomal data in Erodium: chromosome alteration, polyploidy, dysploidy, and symmetrical karyotypes. Turk J Bot. 2020;44(3):255-68.
- Martin E, Celep F, Eroğlu HE. Comparative chromosomal features and new karyological data in Salvia: B‑chromosomes, polyploidy, dysploidy and symmetric karyotypes. Braz J Bot. 2022;45:625-34.
- Srivastava P, Srivastava S, Verma MK, Mishra SK. Karyological studies in root-tip cells of Cannabis sativa var. indica. Cytologia. 1999;64:435-40.
- Divashuk MG, Alexandrov OS, Razumova OV, Kirov IV, Karlov GI. Molecular cytogenetic characterization of the dioecious Cannabis sativa with an XY chromosome sex determination system. PLoS One. 2014;9(1):e85118.
- Razumova OV, Alexandrov OS, Divashuk MG, Sukhorada TI, Karlov GI. Molecular cytogenetic analysis of monoecious hemp (Cannabis sativa L.) cultivars reveals its karyotype variations and sex chromosomes constitution. Protoplasma. 2016;253(3):895-901.
- Braich S, Baillie RC, Jewell LS, Spangenberg GC, Cogan NOI. Generation of a comprehensive transcriptome atlas and transcriptome dynamics in medicinal Cannabis. Sci Rep-UK. 2019;9:1-12.
- CCDB [Internet]. Chromosome Count Database; 2024 [cited 2024 Apr 1]. Available from: https://taux.evolseq.net/CCDB_web/home
- Martin E, Kahraman A, Dirmenci T, Bozkurt H, Eroğlu HE. New chromosomal data and karyological relationships in Geranium: basic number alterations, dysploidy, polyploidy, and karyotype asymmetry. Braz Arch Biol Techn. 2022;65:e22210354.
- Levan AK, Fredga K, Sandberg AA. Nomenclature for centromeric position on chromosomes. Hereditas. 1964;52:201-20.
- Paszko B. A critical review and a new proposal of karyotype asymmetry indices. Plant Syst Evol. 2006;258:39-48.
- Peruzzi L, Eroğlu HE. Karyotype asymmetry: again, how to measure and what to measure? Comp Cytogenet. 2013;7:1-9.
- Moteg IT. On the culture of leaf callus tissue of Cannabis sativa. Kromosomo. 1968;74: 2406-14.
Kenevirde (Cannabis sativa L.) Detaylı Karyotip Analizi, Karyotip Asimetrisi ve Poliploidi
Yıl 2024,
Cilt: 13 Sayı: 4, 29 - 32, 30.12.2024
Halil Erhan Eroğlu
,
Nisa Gümüş
,
Güngör Yılmaz
,
Levent Yazici
Öz
Kenevir (Cannabis sativa L.), diploid kromozom sayısı 2n = 20 olan ve sanayi başta olmak üzere birçok alanda kullanılan ekonomik bir bitkidir. Bu çalışmanın amacı, diploid kromozom sayısı 2n = 20 olarak bilinen bitkinin beş farklı genotipini kullanarak detaylı karyotip analizini ve detaylı kromozomal ölçümlerini yapmak, karyotip asimetrisini ilk kez belirlemek ve poliploidi varyasyonlarını araştırmaktır. Diploid kromozom sayısı ve karyotip formülü, 2n = 2x = 20 = 18m + 2sm’dir. Karyotip, küçük metasentrik ve submetasentrik kromozomlara sahiptir. En küçük kromozom uzunluğu, en büyük kromozom uzunluğu, toplam haploid kromozom uzunluğu ve ortalama haploid kromozom uzunluğu sırasıyla 2.41, 3.55, 29.87 ve 2.99 μm’dir. İntrakromozomal ve interkromozomal karyotip asimetrileri, MCA (ortalama sentromerik asimetri) ve CVCL (kromozom uzunluğunun varyasyon katsayısı) parametreleri kullanılarak hesaplandı. Asimetri değerlerine göre tür oldukça simetrik karyotipe sahiptir. Diploid kromozom sayısı 2n = 20 olarak bilinmesine rağmen detaylı karyotip analizi ve karyotip asimetri verileri ilk kez bu çalışma ile ortaya konmuştur. Ayrıca beş farklı genotip üzerinde yapılan çalışmada bir genotipte poliploidi varyasyonu tespit edilmiştir.
Proje Numarası
6602a-FEN/20-422
Kaynakça
- İncekara F. Endüstri bitkileri ve ıslahı. İzmir: Ege Üniversitesi, Ziraat Fakültesi Yayınları; 1971.
- Atakişi İK. Lif bitkileri yetiştirme ve ıslahı. Tekirdağ: Trakya Üniversitesi, Ziraat Fakültesi Yayınları; 1999.
- Hurgobin B, Tamiru-Oli M, Welling MT, Doblin MS, Bacic A, Whelan J, et al. Recent advances in Cannabis sativa genomics research. New Phytol. 2021;230(1):73-89.
- Stebbins GL. Chromosomal evolution in higher plants. London: Edward Arnold Publisher Ltd; 1971.
- Eroğlu HE, Şimşek N, Koç M, Hamzaoğlu E. Karyotype analysis of some Minuartia L. (Caryophyllaceae) taxa. Plant Syst Evol. 2013;299:67-73.
- Martin E, Kahraman A, Dirmenci T, Bozkurt H, Eroğlu HE. Karyotype evolution and new chromosomal data in Erodium: chromosome alteration, polyploidy, dysploidy, and symmetrical karyotypes. Turk J Bot. 2020;44(3):255-68.
- Martin E, Celep F, Eroğlu HE. Comparative chromosomal features and new karyological data in Salvia: B‑chromosomes, polyploidy, dysploidy and symmetric karyotypes. Braz J Bot. 2022;45:625-34.
- Srivastava P, Srivastava S, Verma MK, Mishra SK. Karyological studies in root-tip cells of Cannabis sativa var. indica. Cytologia. 1999;64:435-40.
- Divashuk MG, Alexandrov OS, Razumova OV, Kirov IV, Karlov GI. Molecular cytogenetic characterization of the dioecious Cannabis sativa with an XY chromosome sex determination system. PLoS One. 2014;9(1):e85118.
- Razumova OV, Alexandrov OS, Divashuk MG, Sukhorada TI, Karlov GI. Molecular cytogenetic analysis of monoecious hemp (Cannabis sativa L.) cultivars reveals its karyotype variations and sex chromosomes constitution. Protoplasma. 2016;253(3):895-901.
- Braich S, Baillie RC, Jewell LS, Spangenberg GC, Cogan NOI. Generation of a comprehensive transcriptome atlas and transcriptome dynamics in medicinal Cannabis. Sci Rep-UK. 2019;9:1-12.
- CCDB [Internet]. Chromosome Count Database; 2024 [cited 2024 Apr 1]. Available from: https://taux.evolseq.net/CCDB_web/home
- Martin E, Kahraman A, Dirmenci T, Bozkurt H, Eroğlu HE. New chromosomal data and karyological relationships in Geranium: basic number alterations, dysploidy, polyploidy, and karyotype asymmetry. Braz Arch Biol Techn. 2022;65:e22210354.
- Levan AK, Fredga K, Sandberg AA. Nomenclature for centromeric position on chromosomes. Hereditas. 1964;52:201-20.
- Paszko B. A critical review and a new proposal of karyotype asymmetry indices. Plant Syst Evol. 2006;258:39-48.
- Peruzzi L, Eroğlu HE. Karyotype asymmetry: again, how to measure and what to measure? Comp Cytogenet. 2013;7:1-9.
- Moteg IT. On the culture of leaf callus tissue of Cannabis sativa. Kromosomo. 1968;74: 2406-14.