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Synthesis, Biological Activities and Molecular Docking Studies of New Schiff Bases Derivatives

Yıl 2020, , 681 - 694, 15.07.2020
https://doi.org/10.17714/gumusfenbil.679313

Öz

In this study, new thiophene
Schiff bases with morpholine (1,2) were synthesized. The structures of the
compounds were confirmed by 1H-NMR, 13C-NMR and IR
spectrometry and t
heir antioxidant, antibacterial,
antileishmanial and enzyme activities were tested
. The antioxidant activities observed from compounds
1 and 2 were remarkably high.
According to the results
obtained in our study, the compounds did not have antileishmanial activity (MIC
>20000 µg/ml). It was determined that the synthesized compounds had different
rates of antibacterial activity against nine different standard bacterial
isolates. Enzyme inhibition effect of the compounds 1 and 2 was unimportant
level and the compound exhibited low binding affinity against the enzyme in
molecular docking studies. The compounds 1 and 2 formed many
𝜋 interactions with active site
residue, however, they do not inhibit the enzyme due to did not interact with
key residues of the enzymes. Our in silico and in vitro studies results were
compatible with each other. As a result, the compounds 1 and 2 may be used as
antioxidant and antimicrobial
drugs, If they can be investigated as drug
candidates.

Kaynakça

  • Aridoss, G., Balasubramanian, S., Parthiban, P. and Kabilan, S. 2007. Synthesis, Stereochemistry and Antimicrobial Evaluation of Some N-morpholinoacetyl-2,6-diarylpiperidin-4-ones. European Journal of Medicinal Chemistry, 42, 851-860.
  • Bayrak, Ç., Taslimi, P., Karaman, H.S., Gülçin, I. and Menzek, A., 2019. The First Synthesis, Carbonic Anhydrase Inhibition And Anticholinergic Activities of Some Bromophenol Derivatives with S Including Natural Products. Bioorganic Chemistry, 85, 128-139.
  • Benzie, I.F.F. and Szeto, Y.T., 1999. Total Antioxidant Capacity of Teas by the Ferric Reducing/Antioxidant Power Assay. Journal of Agriculture and Food Chemistry, 47, 633-636.
  • Berg, J.M., Tymoczko, J.L. and Stryer, L., 2002. Glucose 6-Phosphate Dehydrogenase Plays a Key Role in Protection Against Reactive Oxygen Species: New York, W.H Freeman and Company, 1515 p.
  • Berkholz, D.S., Faber, H.R., Savvides, S.N. and Karplus, P.A., 2008. Catalytic Cycle of Human Glutathione Reductase Near 1 Å Resolution. Journal of Molecular Biology, 382, 371-374.
  • Berrade, L., Aisa, B., Ramirez, M.J., Galiano, S., Guccione, S., Moltzau, L.R., Levy, F.O., Nicoletti, F., Battaglia, G., Molinaro, G., Aldana, I., Monge, A. and Perez-Silanes, S., 2011. Novel Benzo[B]Thiophene Derivatives as New Potential Antidepressants with Rapid Onset of Action. Journal of Medicinal Chemistry, 54, 3086-3090.
  • Beutler, E., 1975. Red Cell Metabolism. A Manual of Biochemical Methods: New York, Grune & Stratton, 160 p.
  • Bradford, M. M., 1976. A Rapid and Sensitive Method for The Quantitation of Microgram Quantities of Protein Utilizing The Principle of Protein-Dye Binding. Analytical Biochemistry, 72(1-2), 248-254.
  • Bryant, H.U. and Dere, W.H., 1998. Selective Estrogen Receptor Modulators: An Alternative to Hormone Replacement Therapy. Proceedings of the Society for Experimental Biology and Medicine, 217, 45-52.
  • Carlberg, I. and Mannervik, B., 1981. Purification and Characterization of Glutathione Reductase from Calf Liver. An Improved Procedure for Affinity Chromatography on 2′, 5′-ADP-Sepharose 4B. Analytical Biochemistry, 116(2), 531-536.
  • Da Silva, C.M., da Silva, D.L., Modolob, L.V., Alves, R.B., de Resende, M.A., Martins, C.V.B. and de Fátima, Â., 2011. Schiff bases: A Short Review of Their Antimicrobial Activities. Journal of Advanced Research, 2, 1-8.
  • Erat, M., Sakiroğlu, H. and Ciftçi, M., 2005. Effects of Some Antibiotics on Glutathione Reductase Activities from Human Erythrocytes in Vitro and from Rat Erythrocytes in Vivo. Journal of Enzyme Inhibition and Medicinal Chemistry, 20(1),69-74.
  • Helal, M.H.M., Salem, M.A., El-Gaby,M.S.A. and Aljahdali, M., 2013. Synthesis and Biological Evaluation of Some Novel Thiazole Compounds as Potential Anti-İnflammatory Agents. European Journal of Medicinal Chemistry, 13,65, 517-526.
  • Hwang, S., Mruk, K., Rahighi, S., Raub, A.G., Chen, C., Dorn, L.E., Horikoshi,N., Wakatsuki, S., Chen, J.K. and Mochly-Rosen, D., 2018. Correcting Glucose-6-Phosphate Dehydrogenase Deficiency with A Small-Molecule Activator. Nature Communications, 9, 4045.
  • İskeleli, N.O., Alpaslan, Y.B., Direkel, Ş., Ertürk, A.G., Süleymanoğlu, N. and Ustabaş, R., 2015. The New Schiff Base 4-[(4-Hydroxy-3-fluoro-5-methoxy-benzylidene)amino]-1,5-dimethyl-2-phenyl-1,2-dihydro-pyrazol-3-one: Experimental, DFT Calculational Studies and in Vitro Antimicrobial Activity. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 139, 356-366.
  • Jagtap, V.A.and Agasimundin, Y.S., 2015. Synthesis and Preliminary Evaluation of Some 2-amino-n’-[substituted]-4,5,6,7- tetrahydro-1-benzothiophene-3-carbohydrazide as Antimicrobial Agents. Journal of Pharmacy Research, 9, 10-14.
  • Jiang, J.J., Chang, T.C., Hsu, W.L., Hwang,J.M., and Hsu, L.Y., 2003. Synthesis and Biological Activity of Sulfur-Containing Aryl-aldehyde Schiff Bases. Chemical Pharmaceutical Bulletin, 51, 1307-1310.
  • Karaman, M., Akkemik, E., Budak, H. and Ciftci, M., 2012. In Vitro Effects of Some Drugs on Human Erythrocyte Glutathione Reductase. Journal of Enzyme İnhibition and Medicinal Chemistry, 27(1), 18-23.
  • Kartal, N., Sokmen, M., Tepe, M., Daferera, D., Polissiou, M. and Sökmen, A., 2007. Investigation of the Antioxidant Properties of Ferula Orientalis L. Using a Suitable Extraction Procedure. Food Chemistry, 100, 584-589.
  • Kulandasamy, R., Adhiraki, A.V. and Stables, J.P., 2009. A New Class of Anticonvulsants Possessing 6Hz activity:3,4-Dialkyloxy Thiophene Bishydrazones. European Journal of Medicinal Chemistry, 44, 4376-4384.
  • Kumari, S., Badana, A.K., Mohan, M.G., Shailender G. and Malla, R.R., 2018. Reactive Oxygen Species: A Key Constituent in Cancer Survival. Biomarker Insights, 13, 1-9.
  • Mikus, J. and Steverding, D., 2000. A Simple Colorimetric Method to Screen Drug Cytotoxicity Against Leishmania Using the Dye Alamar Blue®. Parasitology International, 48, 265-269.
  • Ninfali, P., Orsenigo, I., Barociani, L. and Rapa S.,1990. Rapid Purification of Glucose-6-Phosphate Dehydrogenase from Mammal’s Erythrocytes. Preparative Biochemistry, 20, 297–309.
  • Süleymanoğlu, N., Ünver, Y., Ustabaş, R., Direkel, Ş. and Alpaslan, G., 2017. Antileishmanial Activity Study and Theoretical Calculations for 4-Amino-1,2,4-Triazole Derivatives. Journal of Molecular Structure, 1144, 80-86.
  • Turkan, F., Cetin, A. Taslimi, P. Karaman, M. and Gulçin, İ., 2019. Synthesis, Biological Evaluation and Molecular Docking of Novel Pyrazole Derivatives as Potent Carbonic Anhydrase and Acetylcholinesterase Inhibitors. Bioorganic Chemistry, 86, 420-427.
  • Turkan, F., Cetin, A. Taslimi, P. Karaman, M. and Gulçin, İ., 2019. Synthesis, Biological Evaluation and Molecular Docking of Novel Pyrazole Derivatives as Potent Carbonic Anhydrase and Acetylcholinesterase Inhibitors. Bioorganic Chemistry, 86, 420-427.
  • Ünver, Y., Sancak, K., Çelik, F., Birinci, E., Küçük, M., Soylu, S. and Burnaz, N.A., 2014. New Thiophene-1,2,4-triazole-5(3)-ones: Highly Bioactive Thiosemicarbazides, Structures of Schiff Bases and Triazole-thiols. European Journal of Medicinal Chemistry, 84, 639-650.
  • Ünver, Y., Bektaş, E. and Direkel, Ş., 2018. Synthesis and Antioxidant and Antileishmanial Activities of New Bis N-Amino Triazole Derivatives. Russian Journal of General Chemistry,88, 2616-2620.
  • Ünver, Y., Deniz, S., Çelik, F., Akar, Z., Küçük, M. and Sancak, K., 2016. Synthesis of New 1,2,4-Triazole Compounds Containing Schiff and Mannich Bases (Morpholine) with Antioxidant and Antimicrobial Activities. Journal of Enzyme Inhibition and Medicinal Chemistry, 31, 89-95.

Yeni Schiff Bazlı Bileşiklerin Sentezi, Biyolojik Aktivite ve Moleküler Docking Çalışmaları

Yıl 2020, , 681 - 694, 15.07.2020
https://doi.org/10.17714/gumusfenbil.679313

Öz

Bu çalışmada,
morfolinli (1,2) yeni tiyofen Schiff bazları sentezlenmiştir. Bileşiklerin
yapıları, 1H-NMR, 13C-NMR ve IR spektrometrisi ile doğrulanarak antioksidan,
antibakteriyel, antileishmanial ve enzim aktiviteleri test edilmiştir. Bileşik
1 ve 2'den gözlemlenen antioksidan aktiviteler dikkat çekici derecede yüksek
olarak belirlenmiştir. Çalışmamızda elde edilen sonuçlara göre, bileşikler
antileishmanial aktivite göstermemiştir (MIC> 20000 µg / ml). Sentezlenen
bileşiklerin dokuz farklı standart bakteri izolatına karşı farklı
antibakteriyel aktivite oranlarına sahip olduğu belirlenmiştir. Bileşik 1 ve
2'nin enzim inhibisyon etkisi önemsiz düzeyde olup ve bu bileşikler moleküler
docking çalışmalarında enzimlere karşı düşük bağlanma afinitesi
sergilemişlerdir.   



Bileşik 1
ve 2, aktif bölge kalıntısı ile birçok
𝜋 etkileşimi oluşturmuştur., Ancak, bu enzimlerin
önemli  kalıntıları ile etkileşime
girmediği için enzimleri inhibe etmemişleridir. In siliko ve in vitro çalışma
sonuçları birbiri ile uyumludur. Sonuç olarak bileşikler 1 ve 2, ilaç olarak
araştırılırsa, antioksidan ve antimikrobiyal ilaçlar olarak kullanılabilir.

Kaynakça

  • Aridoss, G., Balasubramanian, S., Parthiban, P. and Kabilan, S. 2007. Synthesis, Stereochemistry and Antimicrobial Evaluation of Some N-morpholinoacetyl-2,6-diarylpiperidin-4-ones. European Journal of Medicinal Chemistry, 42, 851-860.
  • Bayrak, Ç., Taslimi, P., Karaman, H.S., Gülçin, I. and Menzek, A., 2019. The First Synthesis, Carbonic Anhydrase Inhibition And Anticholinergic Activities of Some Bromophenol Derivatives with S Including Natural Products. Bioorganic Chemistry, 85, 128-139.
  • Benzie, I.F.F. and Szeto, Y.T., 1999. Total Antioxidant Capacity of Teas by the Ferric Reducing/Antioxidant Power Assay. Journal of Agriculture and Food Chemistry, 47, 633-636.
  • Berg, J.M., Tymoczko, J.L. and Stryer, L., 2002. Glucose 6-Phosphate Dehydrogenase Plays a Key Role in Protection Against Reactive Oxygen Species: New York, W.H Freeman and Company, 1515 p.
  • Berkholz, D.S., Faber, H.R., Savvides, S.N. and Karplus, P.A., 2008. Catalytic Cycle of Human Glutathione Reductase Near 1 Å Resolution. Journal of Molecular Biology, 382, 371-374.
  • Berrade, L., Aisa, B., Ramirez, M.J., Galiano, S., Guccione, S., Moltzau, L.R., Levy, F.O., Nicoletti, F., Battaglia, G., Molinaro, G., Aldana, I., Monge, A. and Perez-Silanes, S., 2011. Novel Benzo[B]Thiophene Derivatives as New Potential Antidepressants with Rapid Onset of Action. Journal of Medicinal Chemistry, 54, 3086-3090.
  • Beutler, E., 1975. Red Cell Metabolism. A Manual of Biochemical Methods: New York, Grune & Stratton, 160 p.
  • Bradford, M. M., 1976. A Rapid and Sensitive Method for The Quantitation of Microgram Quantities of Protein Utilizing The Principle of Protein-Dye Binding. Analytical Biochemistry, 72(1-2), 248-254.
  • Bryant, H.U. and Dere, W.H., 1998. Selective Estrogen Receptor Modulators: An Alternative to Hormone Replacement Therapy. Proceedings of the Society for Experimental Biology and Medicine, 217, 45-52.
  • Carlberg, I. and Mannervik, B., 1981. Purification and Characterization of Glutathione Reductase from Calf Liver. An Improved Procedure for Affinity Chromatography on 2′, 5′-ADP-Sepharose 4B. Analytical Biochemistry, 116(2), 531-536.
  • Da Silva, C.M., da Silva, D.L., Modolob, L.V., Alves, R.B., de Resende, M.A., Martins, C.V.B. and de Fátima, Â., 2011. Schiff bases: A Short Review of Their Antimicrobial Activities. Journal of Advanced Research, 2, 1-8.
  • Erat, M., Sakiroğlu, H. and Ciftçi, M., 2005. Effects of Some Antibiotics on Glutathione Reductase Activities from Human Erythrocytes in Vitro and from Rat Erythrocytes in Vivo. Journal of Enzyme Inhibition and Medicinal Chemistry, 20(1),69-74.
  • Helal, M.H.M., Salem, M.A., El-Gaby,M.S.A. and Aljahdali, M., 2013. Synthesis and Biological Evaluation of Some Novel Thiazole Compounds as Potential Anti-İnflammatory Agents. European Journal of Medicinal Chemistry, 13,65, 517-526.
  • Hwang, S., Mruk, K., Rahighi, S., Raub, A.G., Chen, C., Dorn, L.E., Horikoshi,N., Wakatsuki, S., Chen, J.K. and Mochly-Rosen, D., 2018. Correcting Glucose-6-Phosphate Dehydrogenase Deficiency with A Small-Molecule Activator. Nature Communications, 9, 4045.
  • İskeleli, N.O., Alpaslan, Y.B., Direkel, Ş., Ertürk, A.G., Süleymanoğlu, N. and Ustabaş, R., 2015. The New Schiff Base 4-[(4-Hydroxy-3-fluoro-5-methoxy-benzylidene)amino]-1,5-dimethyl-2-phenyl-1,2-dihydro-pyrazol-3-one: Experimental, DFT Calculational Studies and in Vitro Antimicrobial Activity. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 139, 356-366.
  • Jagtap, V.A.and Agasimundin, Y.S., 2015. Synthesis and Preliminary Evaluation of Some 2-amino-n’-[substituted]-4,5,6,7- tetrahydro-1-benzothiophene-3-carbohydrazide as Antimicrobial Agents. Journal of Pharmacy Research, 9, 10-14.
  • Jiang, J.J., Chang, T.C., Hsu, W.L., Hwang,J.M., and Hsu, L.Y., 2003. Synthesis and Biological Activity of Sulfur-Containing Aryl-aldehyde Schiff Bases. Chemical Pharmaceutical Bulletin, 51, 1307-1310.
  • Karaman, M., Akkemik, E., Budak, H. and Ciftci, M., 2012. In Vitro Effects of Some Drugs on Human Erythrocyte Glutathione Reductase. Journal of Enzyme İnhibition and Medicinal Chemistry, 27(1), 18-23.
  • Kartal, N., Sokmen, M., Tepe, M., Daferera, D., Polissiou, M. and Sökmen, A., 2007. Investigation of the Antioxidant Properties of Ferula Orientalis L. Using a Suitable Extraction Procedure. Food Chemistry, 100, 584-589.
  • Kulandasamy, R., Adhiraki, A.V. and Stables, J.P., 2009. A New Class of Anticonvulsants Possessing 6Hz activity:3,4-Dialkyloxy Thiophene Bishydrazones. European Journal of Medicinal Chemistry, 44, 4376-4384.
  • Kumari, S., Badana, A.K., Mohan, M.G., Shailender G. and Malla, R.R., 2018. Reactive Oxygen Species: A Key Constituent in Cancer Survival. Biomarker Insights, 13, 1-9.
  • Mikus, J. and Steverding, D., 2000. A Simple Colorimetric Method to Screen Drug Cytotoxicity Against Leishmania Using the Dye Alamar Blue®. Parasitology International, 48, 265-269.
  • Ninfali, P., Orsenigo, I., Barociani, L. and Rapa S.,1990. Rapid Purification of Glucose-6-Phosphate Dehydrogenase from Mammal’s Erythrocytes. Preparative Biochemistry, 20, 297–309.
  • Süleymanoğlu, N., Ünver, Y., Ustabaş, R., Direkel, Ş. and Alpaslan, G., 2017. Antileishmanial Activity Study and Theoretical Calculations for 4-Amino-1,2,4-Triazole Derivatives. Journal of Molecular Structure, 1144, 80-86.
  • Turkan, F., Cetin, A. Taslimi, P. Karaman, M. and Gulçin, İ., 2019. Synthesis, Biological Evaluation and Molecular Docking of Novel Pyrazole Derivatives as Potent Carbonic Anhydrase and Acetylcholinesterase Inhibitors. Bioorganic Chemistry, 86, 420-427.
  • Turkan, F., Cetin, A. Taslimi, P. Karaman, M. and Gulçin, İ., 2019. Synthesis, Biological Evaluation and Molecular Docking of Novel Pyrazole Derivatives as Potent Carbonic Anhydrase and Acetylcholinesterase Inhibitors. Bioorganic Chemistry, 86, 420-427.
  • Ünver, Y., Sancak, K., Çelik, F., Birinci, E., Küçük, M., Soylu, S. and Burnaz, N.A., 2014. New Thiophene-1,2,4-triazole-5(3)-ones: Highly Bioactive Thiosemicarbazides, Structures of Schiff Bases and Triazole-thiols. European Journal of Medicinal Chemistry, 84, 639-650.
  • Ünver, Y., Bektaş, E. and Direkel, Ş., 2018. Synthesis and Antioxidant and Antileishmanial Activities of New Bis N-Amino Triazole Derivatives. Russian Journal of General Chemistry,88, 2616-2620.
  • Ünver, Y., Deniz, S., Çelik, F., Akar, Z., Küçük, M. and Sancak, K., 2016. Synthesis of New 1,2,4-Triazole Compounds Containing Schiff and Mannich Bases (Morpholine) with Antioxidant and Antimicrobial Activities. Journal of Enzyme Inhibition and Medicinal Chemistry, 31, 89-95.
Toplam 29 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Mühendislik
Bölüm Makaleler
Yazarlar

Dilek Ünlüer 0000-0003-1939-2246

Yasemin Ünver 0000-0001-5834-3223

Ersan Bektaş 0000-0001-9030-6908

Şahin Direkel 0000-0003-3368-0447

Muhammet Karaman 0000-0002-0155-3390

Halide Sedef Karaman 0000-0001-7925-7156

Yayımlanma Tarihi 15 Temmuz 2020
Gönderilme Tarihi 24 Ocak 2020
Kabul Tarihi 1 Haziran 2020
Yayımlandığı Sayı Yıl 2020

Kaynak Göster

APA Ünlüer, D., Ünver, Y., Bektaş, E., Direkel, Ş., vd. (2020). Yeni Schiff Bazlı Bileşiklerin Sentezi, Biyolojik Aktivite ve Moleküler Docking Çalışmaları. Gümüşhane Üniversitesi Fen Bilimleri Dergisi, 10(3), 681-694. https://doi.org/10.17714/gumusfenbil.679313