Araştırma Makalesi
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Karkamış Baraj Gölü'nde Gökkuşağı Alabalığı (Oncorhynchus mykiss) Yetiştiriciliği Yapan Işletmelerden Janthinobacterium lividum'un Izolasyonu, Identifikasyonu ve Antibiyotik Duyarlılığı

Yıl 2025, Cilt: 11 Sayı: 2, 676 - 686, 29.12.2025
https://doi.org/10.29132/ijpas.1819325

Öz

Karkamış Baraj Gölünde faaliyet gösteren alabalık yetiştiricilik tesislerinden enfeksiyona dayalı ölüm bildirisi ile işletmelere gidildi. Hasta gökkuşağı alabalıkları klinik muayeneden geçirildi. Balıklarda yavaş hareket, yeme tepkisizlik, vücut renginde kararma, ekzoftalmus ve ara sıra vücut yüzeyinde görülen ülserler tespit edildi. Hastalık semtomu gösteren balıklardan karaciğer, dalak, böbrek, bağırsak ve deri örnekleri alındı ve hem genel hem de özel besiyerlerinde ekimler yapıldı. Bu örnekler bir inkübatörde 24°C arasında değişen sıcaklıklarda 48 saatlik bir süre boyunca inkübe edildi. Besiyerinde saflaştırılan suşlara biyokimyasal tanımlama testlerinin yanı sıra Gram-pozitif ve Gram-negatif bakterilerin tür düzeyinde tanımlanmasında kulanılan (Biolog GEN III) 94 biyokimyasal tanımlama test yapıldı. Bu testlerin sonucunda 11 Janthinobacterium lividum bakterisi tanımlandı. Disk difüzyon testi sonucunda izolatların amoksisilin, penisilin, oksitetrasiklin, gentamisin, enrofloksasin, florfenikol ve amoksisilin/klavulanik asit duyarlı, eritromisin ve kolistin sülfata ise dirençli olduğu belirlendi.

Kaynakça

  • [1] FAO, In Brief to The State of World Fisheries and Aquaculture 2024: Blue Transformation in Action, Rome, Italy, 2024.
  • [2] Medina, M., Fernandez-Espinel, C., Sotil, G., Yunis-Aguinaga, J. and Flores-Dominick, V. (2020). First description of Weissella ceti associated with mortalities in farmed rainbow trout (Oncorhynchus mykiss) in Peru. Aquaculture, 529, 735608.
  • [3] Naylor, R. L. et al. (2021). A 20-year retrospective review of global aquaculture. Nature, 591(7851), 551–563.
  • [4] TÜİK, Su Ürünleri İstatistikleri, Türkiye İstatistik Kurumu, Ankara, Türkiye, 2024. [Online]. Available: https://tuik.gov.tr
  • [5] T.C. Tarım ve Orman Bakanlığı, Su Ürünleri İstatistikleri, Ankara, Türkiye, 2024. [Online]. Available: https://istatistik.tarimorman.gov.tr/Sayfa/Detay/2041
  • [6] Maezono, M., Nielsen, R., Buchmann, K. and Nielsen, M. (2025). The current state of knowledge of the economic impact of diseases in global aquaculture,” Rev. Aquac., 17(3), e70039.
  • [7] Kuzucu, O. and Özcan, M. (2023). Investigation of infection Hafnia alvei in rainbow trout cage facilities in the Down Fırat Basin. Hydrobiological Research, 1(1), 38–46.
  • [8] Austin B. and Austin, D. A. (2016). Pseudomonads,” in Bacterial Fish Pathogens, Springer, pp. 475–498.
  • [9] Valdes, N. et al. (2015). Draft genome sequence of Janthinobacterium lividum strain MTR reveals its mechanism of capnophilic behavior. Standards Genomic Sci., 10, 1–10.
  • [10] Schloss, P. D. et al. (2010). Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin. DNA Cell Biol., 29(9), 533–541.
  • [11] Pantanella, F. et al. (2007). Violacein and biofilm production in Janthinobacterium lividum. J. Appl. Microbiol., 102(4), 992–999.
  • [12] Harris, R. N. et al. (2009). Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus. ISME J., 3(7), 818–824.
  • [13] Austin, B. et al. (1992). Recovery of Janthinobacterium lividum from diseased rainbow trout (Oncorhynchus mykiss) in Northern Ireland and Scotland. J. Fish Dis., 15, 357–359.
  • [14] Oh, W. T. et al. (2019). Janthinobacterium lividum as an emerging pathogenic bacterium affecting rainbow trout fisheries in Korea. Pathogens, 8(3), 146.
  • [15] Frerichs, G. N. and Millar, S. D. (1993). Manual for the Isolation and Identification of Fish Bacterial Pathogens, Stirling, UK: Institute of Aquaculture, Univ. of Stirling,
  • [16] Timur, G. and Timur, M. (2003). Fish Diseases, Istanbul, Türkiye: Istanbul Univ. Rectorate Publ.
  • [17] Arda, M., Seçer, S. and Sarıeyyüpoğlu, S. (2005). Fish Diseases, Ankara, Türkiye: Medisan Publ.
  • [18] Palleroni, N. J. (2015). Pseudomonas,” in Bergey’s Manual of Systematics of Archaea and Bacteria. Wiley.
  • [19] Singh, J., Batra, N. and Sobti, R. C. (2001). Serine alkaline protease from a newly isolated Bacillus sp. SSR1. Process Biochem., 36, 781–785.
  • [20] CLSI, Methods for Antimicrobial Disk Susceptibility Testing of Bacteria Isolated from Aquatic Animals (VET03-A), 2006.
  • [21] CLSI, Performance Standards for Antimicrobial Susceptibility Testing of Bacteria Isolated from Aquatic Animals, 2nd ed., 2014.
  • [22] Bletz, M. C. et al. (2013). Mitigating amphibian chytridiomycosis with bioaugmentation. Ecol. Lett., 16(6), 807–820.
  • [23] Rebollar, E. A. et al. (2016). Horizontal transmission of the antifungal probiotic bacterium Janthinobacterium lividum. Appl. Environ. Microbiol., 82(8), 2457–2466.
  • [24] Brucker, R. M. et al. (2008). Antifungal metabolites of Janthinobacterium lividum. J. Chem. Ecol., 34(11), 1422–1429.
  • [25] Roberts, R. J. (2012). Fish Pathology, 4th ed., Oxford, UK: Wiley-Blackwell.
  • [26] Testerman, T. et al. (2021). Draft genome sequence of Janthinobacterium lividum ID1246. Microbiol. Resour. Announc., vol. 10.
  • [27] Lu, H. et al. (2020). Janthinobacterium violaceinigrum sp. nov., J. aquaticum sp. nov. and J. rivuli sp. nov. Int. J. Syst. Evol. Microbiol., 70(4), 2719–2725.
  • [28] Bochner, B. R. (1989). Sleuthing out bacterial identities. Nature, 339, 157–158.
  • [29] Bochner, B. R. (1989). Breathprints at the microbial level. ASM News, 55, 536–539.
  • [30] Biolog Inc., Biolog GEN III MicroPlate™ Instructions for Use, 2025. [Online]. Available: https://www.biolog.com
  • [31] Gillis, M. and Logan, N. A. (2015). Janthinobacterium,” in Bergey’s Manual of Systematics of Archaea and Bacteria. Wiley.
  • [32] Baricz, A. et al. (2018). Investigating the potential use of an Antarctic variant of Janthino-bacterium lividum. Sci. Rep., 8, 15272.

Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake

Yıl 2025, Cilt: 11 Sayı: 2, 676 - 686, 29.12.2025
https://doi.org/10.29132/ijpas.1819325

Öz

Fish farms operating in the Karkamış Dam Lake were visited following reports of infection-related mortalitie. A clinical examination was conducted on sick rainbow trout. The clinical signs were observed as slow movement, unresponsiveness to food, darkening of body colour, exophthalmus and occasional ulcers on the skin. Samples were obtained from fish exhibiting symptoms of the disease and cultured on both general and special media. These samples were then incubated in an incubator at temperatures ranging from 24°C for a period of 48 hours. The media-purified strains were then subjected to 94 biochemical identification tests (Biolog GEN III) for the identification of Gram-positive and Gram-negative bacteria to species level, as well as biochemical identification tests. In this study, a total of 11 Janthinobacterium lividum isolates were identified. Antibiotic susceptibility testing using the disk diffusion method revealed that all isolates were sensitive to amoxicillin, penicillin, oxytetracycline, gentamicin, enrofloxacin, florfenicol, and amoxicillin/clavulanic acid. In contrast, resistance was observed against erythromycin and colistin sulfate.

Kaynakça

  • [1] FAO, In Brief to The State of World Fisheries and Aquaculture 2024: Blue Transformation in Action, Rome, Italy, 2024.
  • [2] Medina, M., Fernandez-Espinel, C., Sotil, G., Yunis-Aguinaga, J. and Flores-Dominick, V. (2020). First description of Weissella ceti associated with mortalities in farmed rainbow trout (Oncorhynchus mykiss) in Peru. Aquaculture, 529, 735608.
  • [3] Naylor, R. L. et al. (2021). A 20-year retrospective review of global aquaculture. Nature, 591(7851), 551–563.
  • [4] TÜİK, Su Ürünleri İstatistikleri, Türkiye İstatistik Kurumu, Ankara, Türkiye, 2024. [Online]. Available: https://tuik.gov.tr
  • [5] T.C. Tarım ve Orman Bakanlığı, Su Ürünleri İstatistikleri, Ankara, Türkiye, 2024. [Online]. Available: https://istatistik.tarimorman.gov.tr/Sayfa/Detay/2041
  • [6] Maezono, M., Nielsen, R., Buchmann, K. and Nielsen, M. (2025). The current state of knowledge of the economic impact of diseases in global aquaculture,” Rev. Aquac., 17(3), e70039.
  • [7] Kuzucu, O. and Özcan, M. (2023). Investigation of infection Hafnia alvei in rainbow trout cage facilities in the Down Fırat Basin. Hydrobiological Research, 1(1), 38–46.
  • [8] Austin B. and Austin, D. A. (2016). Pseudomonads,” in Bacterial Fish Pathogens, Springer, pp. 475–498.
  • [9] Valdes, N. et al. (2015). Draft genome sequence of Janthinobacterium lividum strain MTR reveals its mechanism of capnophilic behavior. Standards Genomic Sci., 10, 1–10.
  • [10] Schloss, P. D. et al. (2010). Psychrotrophic strain of Janthinobacterium lividum from a cold Alaskan soil produces prodigiosin. DNA Cell Biol., 29(9), 533–541.
  • [11] Pantanella, F. et al. (2007). Violacein and biofilm production in Janthinobacterium lividum. J. Appl. Microbiol., 102(4), 992–999.
  • [12] Harris, R. N. et al. (2009). Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus. ISME J., 3(7), 818–824.
  • [13] Austin, B. et al. (1992). Recovery of Janthinobacterium lividum from diseased rainbow trout (Oncorhynchus mykiss) in Northern Ireland and Scotland. J. Fish Dis., 15, 357–359.
  • [14] Oh, W. T. et al. (2019). Janthinobacterium lividum as an emerging pathogenic bacterium affecting rainbow trout fisheries in Korea. Pathogens, 8(3), 146.
  • [15] Frerichs, G. N. and Millar, S. D. (1993). Manual for the Isolation and Identification of Fish Bacterial Pathogens, Stirling, UK: Institute of Aquaculture, Univ. of Stirling,
  • [16] Timur, G. and Timur, M. (2003). Fish Diseases, Istanbul, Türkiye: Istanbul Univ. Rectorate Publ.
  • [17] Arda, M., Seçer, S. and Sarıeyyüpoğlu, S. (2005). Fish Diseases, Ankara, Türkiye: Medisan Publ.
  • [18] Palleroni, N. J. (2015). Pseudomonas,” in Bergey’s Manual of Systematics of Archaea and Bacteria. Wiley.
  • [19] Singh, J., Batra, N. and Sobti, R. C. (2001). Serine alkaline protease from a newly isolated Bacillus sp. SSR1. Process Biochem., 36, 781–785.
  • [20] CLSI, Methods for Antimicrobial Disk Susceptibility Testing of Bacteria Isolated from Aquatic Animals (VET03-A), 2006.
  • [21] CLSI, Performance Standards for Antimicrobial Susceptibility Testing of Bacteria Isolated from Aquatic Animals, 2nd ed., 2014.
  • [22] Bletz, M. C. et al. (2013). Mitigating amphibian chytridiomycosis with bioaugmentation. Ecol. Lett., 16(6), 807–820.
  • [23] Rebollar, E. A. et al. (2016). Horizontal transmission of the antifungal probiotic bacterium Janthinobacterium lividum. Appl. Environ. Microbiol., 82(8), 2457–2466.
  • [24] Brucker, R. M. et al. (2008). Antifungal metabolites of Janthinobacterium lividum. J. Chem. Ecol., 34(11), 1422–1429.
  • [25] Roberts, R. J. (2012). Fish Pathology, 4th ed., Oxford, UK: Wiley-Blackwell.
  • [26] Testerman, T. et al. (2021). Draft genome sequence of Janthinobacterium lividum ID1246. Microbiol. Resour. Announc., vol. 10.
  • [27] Lu, H. et al. (2020). Janthinobacterium violaceinigrum sp. nov., J. aquaticum sp. nov. and J. rivuli sp. nov. Int. J. Syst. Evol. Microbiol., 70(4), 2719–2725.
  • [28] Bochner, B. R. (1989). Sleuthing out bacterial identities. Nature, 339, 157–158.
  • [29] Bochner, B. R. (1989). Breathprints at the microbial level. ASM News, 55, 536–539.
  • [30] Biolog Inc., Biolog GEN III MicroPlate™ Instructions for Use, 2025. [Online]. Available: https://www.biolog.com
  • [31] Gillis, M. and Logan, N. A. (2015). Janthinobacterium,” in Bergey’s Manual of Systematics of Archaea and Bacteria. Wiley.
  • [32] Baricz, A. et al. (2018). Investigating the potential use of an Antarctic variant of Janthino-bacterium lividum. Sci. Rep., 8, 15272.
Toplam 32 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Sucul Kültür ve Balıkçılık (Diğer)
Bölüm Araştırma Makalesi
Yazarlar

Mikail Özcan 0000-0001-9032-0697

Oğuzhan Kuzucu 0000-0002-9152-0663

Gönderilme Tarihi 7 Kasım 2025
Kabul Tarihi 22 Aralık 2025
Yayımlanma Tarihi 29 Aralık 2025
Yayımlandığı Sayı Yıl 2025 Cilt: 11 Sayı: 2

Kaynak Göster

APA Özcan, M., & Kuzucu, O. (2025). Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake. International Journal of Pure and Applied Sciences, 11(2), 676-686. https://doi.org/10.29132/ijpas.1819325
AMA Özcan M, Kuzucu O. Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake. International Journal of Pure and Applied Sciences. Aralık 2025;11(2):676-686. doi:10.29132/ijpas.1819325
Chicago Özcan, Mikail, ve Oğuzhan Kuzucu. “Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake”. International Journal of Pure and Applied Sciences 11, sy. 2 (Aralık 2025): 676-86. https://doi.org/10.29132/ijpas.1819325.
EndNote Özcan M, Kuzucu O (01 Aralık 2025) Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake. International Journal of Pure and Applied Sciences 11 2 676–686.
IEEE M. Özcan ve O. Kuzucu, “Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake”, International Journal of Pure and Applied Sciences, c. 11, sy. 2, ss. 676–686, 2025, doi: 10.29132/ijpas.1819325.
ISNAD Özcan, Mikail - Kuzucu, Oğuzhan. “Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake”. International Journal of Pure and Applied Sciences 11/2 (Aralık2025), 676-686. https://doi.org/10.29132/ijpas.1819325.
JAMA Özcan M, Kuzucu O. Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake. International Journal of Pure and Applied Sciences. 2025;11:676–686.
MLA Özcan, Mikail ve Oğuzhan Kuzucu. “Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake”. International Journal of Pure and Applied Sciences, c. 11, sy. 2, 2025, ss. 676-8, doi:10.29132/ijpas.1819325.
Vancouver Özcan M, Kuzucu O. Isolation, Identification and Antibiotic Susceptibility of Janthinobacterium lividum from Rainbow Trout (Oncorhynchus mykiss) Cultured in Karkamış Dam Lake. International Journal of Pure and Applied Sciences. 2025;11(2):676-8.